DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment shrb and chmp4c

DIOPT Version :9

Sequence 1:	NP_610462.3	Gene:	shrb / 35933	FlyBaseID:	FBgn0086656	Length:	226	Species:	Drosophila melanogaster
Sequence 2:	XP_002936670.1	Gene:	chmp4c / 100495807	XenbaseID:	XB-GENE-954321	Length:	222	Species:	Xenopus tropicalis

Alignment Length:	234	Identity:	123/234 - (52%)
Similarity:	159/234 - (67%)	Gaps:	22/234 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MSFFGKMF---GG-----KKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKN 57
            ||...|:|   ||     |....|:..||:.||||||.||.||||:||.|||.||..|:|:.:||
Frog     1 MSKITKLFKSSGGSGSSSKNRKGPSAQEALFKLRETEEMLTKKQEYLEKKIELELATAKKHGTKN 65

  Fly    58 KRVALQALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVD 122
            ||.||||||:||::||||.||||||||||.||||||:::|||.||..|..||.|:|..|:|||::
Frog    66 KRAALQALKRKKKMEKQLAQIDGTLSTIEFQREALENSHTNTEVLKNMGYAAKAMKAVHENMDLE 130

  Fly   123 KVHDMMDDIAEQQDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLP 187
            |:.::|.||.||||||:|||||||.|..|..|.|:::|..||:|||||:.:.::..:     .||
Frog   131 KIDNLMQDIHEQQDVAQEISDAISRPAGFCDDFDEDELMAELEELEQEDMNSQMANV-----KLP 190

  Fly   188 EAPTEDLPEK-AKEKKKATTTTAVEDDDDPDMKQLLSWS 225
            ..|:..||.: |..:||      |||||  ||:.|.:|:
Frog   191 SVPSTKLPSRPASSRKK------VEDDD--DMQMLAAWA 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
shrb	NP_610462.3	Snf7	20..193	CDD:281366	101/172 (59%)
chmp4c	XP_002936670.1	Snf7	28..196	CDD:367460	101/172 (59%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	215	1.000	Domainoid score	I2662
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	245	1.000	Inparanoid score	I3206
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1490465at2759
OrthoFinder	1	1.000	-	-		FOG0001179
OrthoInspector	1	1.000	-	-		otm49459
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1162
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.060