DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and GAL83

DIOPT Version :9

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_010944.1 Gene:GAL83 / 856749 SGDID:S000000829 Length:417 Species:Saccharomyces cerevisiae


Alignment Length:373 Identity:95/373 - (25%)
Similarity:143/373 - (38%) Gaps:126/373 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KHTAVLNEGSSQEDDD---PY--YTGTGTGSTRRGTAHDDATSAVTRDHSSMDNNEEEEEAAVGA 135
            |.:.:.|:    :|||   ||  :...|:|.|.......||:|:     ||:|:||.:...|   
Yeast    63 KSSLIFND----DDDDEIPPYSNHAENGSGETFDSDDDIDASSS-----SSIDSNEGDIHDA--- 115

  Fly   136 EPATGSQL-------TGDEDDI---------------------RKTALPTVLRWDGGGKNVTISG 172
             ..||:.|       :...|.:                     |....|..:.|..||..|.::|
Yeast   116 -DMTGNTLQKMDYQPSQQPDSLQNQGFQQQQEQQQGTVEGKKGRAMMFPVDITWQQGGNKVYVTG 179

  Fly   173 TFSDWKPM---AMVRSHQNFVTI-IDLPEGDHQYKFCVDGEWKHDPKLKSVENAEGQRNNLVSVR 233
            :|:.|:.|   ..|......:.: :.||.|.|:::|.||.|.:....|.:   |..|..|.|:..
Yeast   180 SFTGWRKMIGLVPVPGQPGLMHVKLQLPPGTHRFRFIVDNELRFSDYLPT---ATDQMGNFVNYM 241

  Fly   234 E----SDF--EVFQALAKDSEN--------------------------------VTNYAEK---- 256
            |    .|:  |..|.||:...|                                .|.:.::    
Yeast   242 EVSAPPDWGNEPQQHLAEKKANHVDDSKLSKRPMSARSRIALEIEKEPDDMGDGYTRFHDETPAK 306

  Fly   257 ---EYSQEVPQV-----------------------KPWEKVSGPPVLPPHLLQVILNKDTPLSCE 295
               ||:|::|.|                       ..|   ..||.|||||..||||..:....:
Yeast   307 PNLEYTQDIPAVFTDPNVMEQYYLTLDQQQNNHQNMAW---LTPPQLPPHLENVILNSYSNAQTD 368

  Fly   296 PT--LLPEPNHVMLNHLYALSIKDGVMVLSATHRYRKKYVTTLLYKPI 341
            .|  .||.||||:||||...|||...:.:::..||::||||.:||.|:
Yeast   369 NTSGALPIPNHVILNHLATSSIKHNTLCVASIVRYKQKYVTQILYTPL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 156..238 CDD:293169 25/91 (27%)
AMPKBI 254..341 CDD:214973 39/118 (33%)
GAL83NP_010944.1 AMPK1_CBM 163..247 CDD:406865 24/86 (28%)
AMPKBI 306..416 CDD:214973 39/112 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345583
Domainoid 1 1.000 66 1.000 Domainoid score I2374
eggNOG 1 0.900 - - E1_KOG1616
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1564
Isobase 1 0.950 - 0.709796 Normalized mean entropy S1949
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001107
OrthoInspector 1 1.000 - - otm46599
orthoMCL 1 0.900 - - OOG6_101253
Panther 1 1.100 - - LDO PTHR10343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1739
SonicParanoid 1 1.000 - - X946
TreeFam 1 0.960 - -
1312.730

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