DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and SIP2

DIOPT Version :9

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_011307.1 Gene:SIP2 / 852664 SGDID:S000003176 Length:415 Species:Saccharomyces cerevisiae


Alignment Length:351 Identity:87/351 - (24%)
Similarity:136/351 - (38%) Gaps:96/351 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KKHTAVLNEGSSQEDDDP-------YYTGTGTGSTRRGTAHDDATSAVTR------------DHS 120
            ||.|.:|     :::|:|       ..|...|.|....|:.|:....:.:            |.|
Yeast    74 KKSTLLL-----RDEDEPTMPKLSVMETAVDTDSGSSSTSDDEEGDIIAQTTEPKQDASPDDDRS 133

  Fly   121 SMDNNEEEEEAAVGAEPATGSQLTGDEDDIRKTALPTVLRWDGGGKNVTISGTFSDWKPM-AMVR 184
            ...:..||.:..:.|:.|:|    |..:......:|..:||..||..|.::|:|:.|:.| .::.
Yeast   134 GHSSPREEGQQQIRAKEASG----GPSEIKSSLMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIP 194

  Fly   185 SHQN---FVTIIDLPEGDHQYKFCVDGEWKHDPKLKSVENAEGQRNNLVSVRESD---------- 236
            ...|   |...:.|..|.|:::|.||.|.:....|.:..:..|...|.:.||:.:          
Yeast   195 DSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVNYIEVRQPEKNPTNEKIRS 259

  Fly   237 -------------FEVFQALAKD----SENVTNYAEK-------EYSQEVPQV------------ 265
                         ..:...:.||    .:..|.:.|.       ||:.::|.|            
Yeast   260 KEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMERYYY 324

  Fly   266 ----------KPWEKVSGPPVLPPHLLQVILNK-----DTPLSCEPTLLPEPNHVMLNHLYALSI 315
                      ..|   ..||.|||.|..|||||     |.........||.||||:||||...||
Yeast   325 TLDRQQSNTDTSW---LTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSI 386

  Fly   316 KDGVMVLSATHRYRKKYVTTLLYKPI 341
            |...:.:::..||::||||.:||.||
Yeast   387 KHNTLCVASIVRYKQKYVTQILYTPI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 156..238 CDD:293169 24/108 (22%)
AMPKBI 254..341 CDD:214973 39/120 (33%)
SIP2NP_011307.1 AMPK1_CBM 164..249 CDD:406865 24/84 (29%)
AMPKBI 299..412 CDD:214973 38/115 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345582
Domainoid 1 1.000 66 1.000 Domainoid score I2374
eggNOG 1 0.900 - - E1_KOG1616
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1564
Isobase 1 0.950 - 0.709796 Normalized mean entropy S1949
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001107
OrthoInspector 1 1.000 - - otm46599
orthoMCL 1 0.900 - - OOG6_101253
Panther 1 1.100 - - O PTHR10343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1739
SonicParanoid 1 1.000 - - X946
TreeFam 1 0.960 - -
1312.730

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