DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and prkab1b

DIOPT Version :9

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001315483.1 Gene:prkab1b / 335232 ZFINID:ZDB-GENE-030131-7172 Length:260 Species:Danio rerio


Alignment Length:206 Identity:123/206 - (59%)
Similarity:149/206 - (72%) Gaps:10/206 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 DEDDIRKTAL---PTVLRWDGGGKNVTISGTFSDW-KPMAMVRSHQNFVTIIDLPEGDHQYKFCV 206
            |::...||.|   |||.||.|.||.:.:||:|::| ..:.:.:||.|||.|||||||:|||||.|
Zfish    55 DQESDSKTPLEERPTVFRWKGPGKEIYLSGSFNNWATKIPLNKSHNNFVAIIDLPEGEHQYKFYV 119

  Fly   207 DGEWKHDPKLKSVENAEGQRNNLVSVRESDFEVFQALAKDSENVTNYAEKE------YSQEVPQV 265
            ||.|..|||...|.|..|..||::.||::|||||.||..|||...:.::..      |.|:....
Zfish   120 DGHWTLDPKEPVVTNKSGVVNNVIKVRKTDFEVFDALKTDSEKCADMSDLSSSPPGPYHQDPYST 184

  Fly   266 KPWEKVSGPPVLPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYRK 330
            |..:|:..||:||||||||:|||||.:||:|||||||||||||||||||||||||||||||||:|
Zfish   185 KSEDKLRSPPILPPHLLQVLLNKDTGISCDPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYKK 249

  Fly   331 KYVTTLLYKPI 341
            |||||||||||
Zfish   250 KYVTTLLYKPI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 156..238 CDD:293169 44/82 (54%)
AMPKBI 254..341 CDD:214973 64/92 (70%)
prkab1bNP_001315483.1 AMPK1_CBM 68..151 CDD:293169 44/82 (54%)
AMPKBI 171..260 CDD:214973 64/88 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574782
Domainoid 1 1.000 134 1.000 Domainoid score I4970
eggNOG 1 0.900 - - E1_KOG1616
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I3264
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D511710at33208
OrthoFinder 1 1.000 - - FOG0001107
OrthoInspector 1 1.000 - - otm25785
orthoMCL 1 0.900 - - OOG6_101253
Panther 1 1.100 - - O PTHR10343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1739
SonicParanoid 1 1.000 - - X946
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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