DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and amk2

DIOPT Version :9

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_588485.1 Gene:amk2 / 2539130 PomBaseID:SPCC1919.03c Length:298 Species:Schizosaccharomyces pombe


Alignment Length:266 Identity:84/266 - (31%)
Similarity:132/266 - (49%) Gaps:48/266 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 AHDDATSAVTRDHSSMDNNEEE----EEAAVGAEPATG-----SQLTGDEDDIRKT-------AL 155
            |.||    :.::....|:|::|    ..:..|...::|     ||.:|     :||       .:
pombe    44 AADD----LNQEGEMSDDNQQEGGNNRTSQNGTSGSSGHTKRRSQTSG-----KKTHQPYSGPCV 99

  Fly   156 PTVLRWDGGGKNVTISGTFSDWKPMAMVRSHQNFVTIIDLPEGDHQYKFCVDGEWKHDPKLKSVE 220
            ||::||.|||:.|.::|:||.||....:...:::..::.|..|..::||.|||.|.......:..
pombe   100 PTIIRWRGGGEVVYVTGSFSRWKKKIQLLKSEDYTVLLQLRPGTQRFKFLVDGIWCCSSDFPTAT 164

  Fly   221 NAEGQRNNLVSV------------RESDFEVFQALAKDSENVTNYAEKEYSQEVPQVKPWE---- 269
            :|||...|.:.|            |.|.......:.:.||:      ::||.|:|......    
pombe   165 DAEGNLYNYLEVEANEKLGASIDERLSQVHTDLPMEEKSES------EQYSTEIPAFLTSNTLQE 223

  Fly   270 -KVSGPPVLPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYRKKYV 333
             |:..||.|||||.:.|||.:|....:.::||.||||:||||.|.:.:.||:.||||.||.:|||
pombe   224 LKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANTQLGVLALSATTRYHRKYV 288

  Fly   334 TTLLYK 339
            ||.::|
pombe   289 TTAMFK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 156..238 CDD:293169 28/93 (30%)
AMPKBI 254..341 CDD:214973 41/91 (45%)
amk2NP_588485.1 AMPK1_CBM 100..180 CDD:293169 26/79 (33%)
AMPKBI 202..294 CDD:214973 42/97 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 78 1.000 Domainoid score I2389
eggNOG 1 0.900 - - E1_KOG1616
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H38160
Inparanoid 1 1.050 128 1.000 Inparanoid score I1442
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001107
OrthoInspector 1 1.000 - - oto100719
orthoMCL 1 0.900 - - OOG6_101253
Panther 1 1.100 - - LDO PTHR10343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1739
SonicParanoid 1 1.000 - - X946
TreeFam 1 0.960 - -
1211.850

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