DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and aakb-2

DIOPT Version :10

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_499446.1 Gene:aakb-2 / 176552 WormBaseID:WBGene00012928 Length:274 Species:Caenorhabditis elegans


Alignment Length:277 Identity:114/277 - (41%)
Similarity:160/277 - (57%) Gaps:40/277 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 TGTGSTRRGTAHDDATSAVTRDHSSMDNNEEEEEAAVGAE----PATGSQLTGDEDDIRKTA-LP 156
            :|....|.|..:|   .|..|.|..|     .|.|.:..:    |..|..:..|:.:..|:. .|
 Worm     6 SGGPDARYGGPND---KAGLRRHRMM-----SETAKIAGQVLPNPDGGPPMIFDDGNEDKSGECP 62

  Fly   157 TVLRW----DGGGKNVTISGTFSDWKP-MAMVRSHQNFVTIIDLPEGDHQYKFCVDGEWKHDPKL 216
            .|.||    :...:.|.|.|::.:|:. :.||:|..:|.|||||..|.::|||.|||.|..|...
 Worm    63 VVFRWSFTQNAQPRVVHIVGSWDNWQTRIPMVKSTNDFSTIIDLQPGQYEYKFQVDGSWVVDDNQ 127

  Fly   217 KSVENAEGQRNNLVSVRESDFEVFQALAKD-------------SENVTNY-------AEK--EYS 259
            ...::..|..||::::::|||.||:||.:|             ||:..|:       .||  .::
 Worm   128 GKAQDVHGNENNMINIQDSDFAVFEALDEDFQSSTAGEVLRGESESTKNHDTPNDRELEKLRSFT 192

  Fly   260 QEVPQVKPWEKVSGPPVLPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSA 324
            ||:|.:....|.:||||:||.|:||:|||:||.||:|.:|||||||||||:|||||||.|||||:
 Worm   193 QEIPSMDMLRKAAGPPVIPPQLMQVLLNKETPESCDPNVLPEPNHVMLNHMYALSIKDSVMVLSS 257

  Fly   325 THRYRKKYVTTLLYKPI 341
            |.|||||:||||||||:
 Worm   258 TQRYRKKFVTTLLYKPV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 155..238 CDD:465176 31/87 (36%)
AMPKBI 254..341 CDD:214973 59/88 (67%)
aakb-2NP_499446.1 AMPK1_CBM 62..148 CDD:465176 30/85 (35%)
AMPKBI 190..274 CDD:214973 57/83 (69%)

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