DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and Prkab2

DIOPT Version :9

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_892042.2 Gene:Prkab2 / 108097 MGIID:1336185 Length:271 Species:Mus musculus


Alignment Length:314 Identity:140/314 - (44%)
Similarity:181/314 - (57%) Gaps:57/314 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GGSAGAAALGAAAGAVGAAGGGGGGGGGQAFSFDKKHTAVLNEGSSQEDDDPYYTGTGTGSTRRG 105
            |.:......|...||..|...|||.|.|      |:|..::  ||:   |||             
Mouse     2 GNTTSERVSGERHGAKAARAEGGGHGPG------KEHKIMV--GST---DDP------------- 42

  Fly   106 TAHDDATSAVTRDHSSMDNNEE----EEEAAVGAEPATGSQLTGDEDDIRKTALPTVLRWDGGGK 166
                   |..:...|.:..::|    :::.....:||             :.|.|||:||..|||
Mouse    43 -------SVFSLPDSKLPGDKEFVPWQQDLDDSVKPA-------------QQARPTVIRWSEGGK 87

  Fly   167 NVTISGTFSDWK-PMAMVRSHQNFVTIIDLPEGDHQYKFCVDGEWKHDPKLKSVENAEGQRNNLV 230
            .|.|||:|::|. .:.:::||.:||.|:|||||:|||||.|||:|.|||....|.:..|..|||:
Mouse    88 EVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLI 152

  Fly   231 SVRESDFEVFQALAKDS--------ENVTNYAEKEYSQEVPQVKPWEKVSGPPVLPPHLLQVILN 287
            .|::||||||.||..||        .::::.....|.||:...:..|:...||:|||||||||||
Mouse   153 HVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILN 217

  Fly   288 KDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYRKKYVTTLLYKPI 341
            |||.:||:|.||||||||||||||||||||.||||||||||:||||||||||||
Mouse   218 KDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 156..238 CDD:293169 44/82 (54%)
AMPKBI 254..341 CDD:214973 63/86 (73%)
Prkab2NP_892042.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 18/74 (24%)
AMPK1_CBM 76..158 CDD:374631 42/81 (52%)
AMPKBI 182..271 CDD:214973 63/88 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I5036
eggNOG 1 0.900 - - E1_KOG1616
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 253 1.000 Inparanoid score I3185
Isobase 1 0.950 - 0.709796 Normalized mean entropy S1949
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001107
OrthoInspector 1 1.000 - - otm42706
orthoMCL 1 0.900 - - OOG6_101253
Panther 1 1.100 - - O PTHR10343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1739
SonicParanoid 1 1.000 - - X946
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.800

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