DRSC/TRiP Functional Genomics Resources

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Protein Alignment alc and prkab2

DIOPT Version :10

Sequence 1:NP_610460.1 Gene:alc / 35931 FlyBaseID:FBgn0260972 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001106572.1 Gene:prkab2 / 100127782 XenbaseID:XB-GENE-976418 Length:271 Species:Xenopus tropicalis


Alignment Length:265 Identity:136/265 - (51%)
Similarity:173/265 - (65%) Gaps:32/265 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RRGTAH--DDATSAVTRDHSSMDNNEEEEEAAVGA--EP-------------ATGSQLTGDEDDI 150
            |.|.:|  |.||..    ||:.::  ||.:..||:  :|             :|..|.:.|....
 Frog    13 RHGKSHRADGATGG----HSTKEH--EENKIMVGSTDDPNIFSTQESKHPGDSTWPQESEDPGKS 71

  Fly   151 RKTALPTVLRWDGGGKNVTISGTFSDW-KPMAMVRSHQNFVTIIDLPEGDHQYKFCVDGEWKHDP 214
            .:...|||:||..|||.|.|||:|::| ..:.:::||.:||.|:|||||:|||||.|||:|.|||
 Frog    72 AQQGRPTVIRWTEGGKEVFISGSFNNWTAKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 136

  Fly   215 KLKSVENAEGQRNNLVSVRESDFEVFQALAKDSENVTNYAEKE--------YSQEVPQVKPWEKV 271
            ....|.:..|..|||:.|::||||||.||..||...::.:.::        |.||:...||.|:.
 Frog   137 SEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSDTSARDLSSSPPGLYGQELYAYKPEERY 201

  Fly   272 SGPPVLPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYRKKYVTTL 336
            ..||:||||||||||||||.:||:|.|||||||||||||||||||||||||||||||:|||||||
 Frog   202 KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTL 266

  Fly   337 LYKPI 341
            |||||
 Frog   267 LYKPI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alcNP_610460.1 AMPK1_CBM 155..238 CDD:465176 44/83 (53%)
AMPKBI 254..341 CDD:214973 66/94 (70%)
prkab2NP_001106572.1 AMPK1_CBM 76..160 CDD:465176 44/83 (53%)
AMPKBI 182..271 CDD:214973 66/88 (75%)

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