DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18659 and SBF1

DIOPT Version :9

Sequence 1:NP_665880.2 Gene:CG18659 / 35929 FlyBaseID:FBgn0027561 Length:908 Species:Drosophila melanogaster
Sequence 2:XP_011529011.1 Gene:SBF1 / 6305 HGNCID:10542 Length:1903 Species:Homo sapiens


Alignment Length:1073 Identity:204/1073 - (19%)
Similarity:334/1073 - (31%) Gaps:352/1073 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GGP--AVPAGVIVESFPEGFRDQE-------------------------------VLTGIPSF-- 63
            |||  ....|.|::.|||  :|.|                               |||.|.|.  
Human    25 GGPGSGEGQGQILQRFPE--KDWEDNPFPQGIELFCQPSGWQLCPERNPPTFFVAVLTDINSERH 87

  Fly    64 ----------AFPCDTTSTSVQTYSFVHTTGDSKWRFGFCRQDPRTNT------AMVLITYLPWH 112
                      |.|....:|.|:..:.....||...:.......|..:.      .:||::.|...
Human    88 YCACLTFWEPAEPSQQETTRVEDATEREEEGDEGGQTHLSPTAPAPSAQLFAPKTLVLVSRLDHT 152

  Fly   113 DTFLKLLPVLAELRRTDPNGFRTFLSEAYNQ----GIPDCGGSLKVYYSAGQSHFTFERPLQFQL 173
            :.|...|.::..:.   ..|....|......    .:|..|||.:............:.||...|
Human   153 EVFRNSLGLIYAIH---VEGLNVCLENVIGNLLTCTVPLAGGSQRTISLGAGDRQVIQTPLADSL 214

  Fly   174 PSMPENHNLNLYYNFVEPKEMIAVFAAMLAERRIIFTSRHLDRLSSCIQAANAFLYPMVWQHIFI 238
            |  ....::.|.:..:....::::|.|.|.|.:::|.||...||:...:...|.|:|:.:...::
Human   215 P--VSRCSVALLFRQLGITNVLSLFCAALTEHKVLFLSRSYQRLADACRGLLALLFPLRYSFTYV 277

  Fly   239 PVLPWEFKDYLGAPMPYLIGV-------PEPVLETVTSD-ELGEVVILNCDTKIFESPFDDVH-- 293
            |:||.:..:.|..|.|::|||       .:.:|:.:.:| :.|.|.|..|           ||  
Human   278 PILPAQLLEVLSTPTPFIIGVNAAFQAETQELLDVIVADLDGGTVTIPEC-----------VHIP 331

  Fly   294 NLPTEIVSQLKKHLNHTHD---HIGD------------------RISKIFLNALVQLIGGYR--- 334
            .||..:.||....|:...|   .:.|                  .:..:||....||:.|||   
Human   332 PLPEPLQSQTHSVLSMVLDPELELADLAFPPPTTSTSSLKMQDKELRAVFLRLFAQLLQGYRWCL 396

  Fly   335 DAVEYH-ENSKTFNSQKFIESRPAHLRPFLAKMMDLQIFAQFIDDRLTMLNSGLGF--SDEFELE 396
            ..|..| |....|:...|:..|......||.|:::...||.|:.:|      |:.:  :|.|: |
Human   397 HVVRIHPEPVIRFHKAAFLGQRGLVEDDFLMKVLEGMAFAGFVSER------GVPYRPTDLFD-E 454

  Fly   397 TVRYAEKKKRGRNYAIMKNLKDKTNPAVKSAVKSVKEGSRGMKTAYKGFKTKLRENGNQFGGTHF 461
            .|.:...:.|.          |:.:|  :..::.|:|           ...:|.:|.|.:.....
Human   455 LVAHEVARMRA----------DENHP--QRVLRHVQE-----------LAEQLYKNENPYPAVAM 496

  Fly   462 HFGLGSPNHSDRPDGTSGGYVRGGKAIGAAHHSAPSSPVTSKRLDGIASVTGSSGSGGSGAREPR 526
            |       ...||              |.:.|.                           .|.||
Human   497 H-------KVQRP--------------GESSHL---------------------------RRVPR 513

  Fly   527 EF--LRRGPVPLAMSSSSSHIQPNGHAYGA--SAGAHYGHHLAASPAVSSASSLCSSSEMNLSQE 587
            .|  |..|.|...:..:::.:|      ||  :..|.....:.:.|.:::....||...:|.::.
Human   514 PFPRLDEGTVQWIVDQAAAKMQ------GAPPAVKAERRTTVPSGPPMTAILERCSGLHVNSARR 572

  Fly   588 LQ-----NHPLFK---------TPAVDRSLKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHP 638
            |:     ...:|:         .|||.|:||..|..|..|                    ...|.
Human   573 LEVVRNCISYVFEGKMLEAKKLLPAVLRALKGRAARRCLA--------------------QELHL 617

  Fly   639 HVESKPPRHTSTPTRPRQPLPTADSSSFDSPPDVQSPPIPPRRQGSSNAIVAATAAAVSAEISKL 703
            ||:              |.....|...||....:.:..:........:.|.||....|:|...||
Human   618 HVQ--------------QNRAVLDHQQFDFVVRMMNCCLQDCTSLDEHGIAAALLPLVTAFCRKL 668

  Fly   704 -------------ERNCWKD---------------------EPGNDSVRSSNASSSSATSSSSGA 734
                         |...|..                     ||..|...:...  ..|.|.....
Human   669 SPGVTQFAYSCVQEHVVWSTPQFWEAMFYGDVQTHIRALYLEPTEDLAPAQEV--GEAPSQEDER 731

  Fly   735 SFVTAASTFSHLNVSDPPIPTPRAKREQQQ----------------------------------- 764
            |.:..||....|        .|...||:||                                   
Human   732 SALDVASEQRRL--------WPTLSREKQQELVQKEESTVFSQAIHYANRMSYLLLPLDSSKSRL 788

  Fly   765 --------PLEDSMNDLI------SLDDSNNTSFDLEDFDPLNQNARPLPPLSTAFAKKCSTLPA 815
                    .||.:.|.|:      |:.:|.:|....||.:..:.....:..::....|.|:  .:
Human   789 LRERAGLGDLESASNSLVTNSMAGSVAESYDTESGFEDAETCDVAGAVVRFINRFVDKVCT--ES 851

  Fly   816 GVNSSVVASSVSNPLYPYFAPKHMATVAAV---TGRTPPMHPPPQIQRNTIAAKPDDDFEL--LR 875
            ||.|..:..  .:.:.|.....|:.|:.||   :.|.||:..|..::...:   |.::..|  ||
Human   852 GVTSDHLKG--LHVMVPDIVQMHIETLEAVQRESRRLPPIQKPKLLRPRLL---PGEECVLDGLR 911

  Fly   876 KYGL-DQFTLNANGTEKSQQLTTGKGMNNWTTF 907
            .|.| |.....|.|:.....|...:|....||:
Human   912 VYLLPDGREEGAGGSAGGPALLPAEGAVFLTTY 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18659NP_665880.2 uDENN 10..95 CDD:214824 21/105 (20%)
DENN 98..282 CDD:280329 43/201 (21%)
dDENN 315..379 CDD:129037 20/85 (24%)
SBF1XP_011529011.1 uDENN 36..92 CDD:281455 11/57 (19%)
DENN 139..320 CDD:214823 39/185 (21%)
dDENN 374..442 CDD:129037 19/67 (28%)
SBF2 553..774 CDD:289132 45/264 (17%)
PH-GRAM_MTMR5 903..1021 CDD:275417 12/42 (29%)
Myotub-related 1138..1566 CDD:284109
PH_Sbf1_hMTMR5 1796..1901 CDD:269941
PH 1800..1901 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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