DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18659 and dennd2c

DIOPT Version :9

Sequence 1:NP_665880.2 Gene:CG18659 / 35929 FlyBaseID:FBgn0027561 Length:908 Species:Drosophila melanogaster
Sequence 2:XP_001919086.4 Gene:dennd2c / 570947 ZFINID:ZDB-GENE-081105-71 Length:920 Species:Danio rerio


Alignment Length:441 Identity:122/441 - (27%)
Similarity:186/441 - (42%) Gaps:64/441 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SSRSGGPA---VPAGVIVESFPEGFRD--------QEVLTGIPSFAFP-C-------DTTSTSVQ 75
            |.|.|.|.   :|.  |.:.||..|..        ::.|..||.|.|| |       |.||   :
Zfish   487 SLRKGSPGNTYIPE--ITQQFPTKFEKSSRLSREAEDRLRAIPKFCFPDCHDWRPSSDHTS---E 546

  Fly    76 TYSFVHTTGDSKWRFGFCR------QDPRTNTAMVLITYLPWHDTFLKLLPVLAELRRTDPNGFR 134
            |:|||.|..|....||:||      :..|......:::.|...:.|.|:|..:...|...|....
Zfish   547 TFSFVLTGEDGSRLFGYCRKILPSGKGKRLPEVHCIVSRLGCFNLFSKILEEVERRREISPALVS 611

  Fly   135 TFLSEAYNQGIPDCGGSLKV---YYSAGQSHFTFERPLQFQLPSMPENHNLNLYYNFVEPKEMIA 196
            .|:........|..|.::.|   ...:|....|..||:..:|    |:.:.......:....::.
Zfish   612 PFMHSVMEAPFPAPGRTITVKSFLPGSGNEVLTLCRPVDSRL----EHVDFESLLQCLSVSRLLQ 672

  Fly   197 VFAAMLAERRIIFTSRHLDRLSSCIQAANAFLYPMVWQHIFIPVLPWEFKDYLGAPMPYLIGVPE 261
            |||:::.|||:||.:..|..||.|..:|.|.|||..|||.|:||||....|...:|.|:::|...
Zfish   673 VFASLMLERRVIFIADKLSVLSRCAHSALALLYPFTWQHTFVPVLPAGMLDICCSPTPFVMGALS 737

  Fly   262 PVLETVTSDELGEVVILN-CDTKIFESPFDDVHNLPTEIVSQLKKHL--------NHTHDHIGDR 317
            |.|..|....:.||:|:: |..|......|:...||:::.:.|::.|        .:..|..||:
Zfish   738 PSLPEVLDMPIEEVLIVDLCTDKFVVQLGDEDCILPSKLQAALQEILENREEILEQNRRDRRGDK 802

  Fly   318 ------ISKIFLNALVQLIGGYRDAVEYHENS-----KTFNSQKFIESRPAH-LRPFLAKMMDLQ 370
                  :|:.|:...|:::|.|.   .|..:|     :......|.:|.|:. :|..|...||.|
Zfish   803 SDLSTLVSEAFVWFFVEIVGHYS---LYMNDSGPGGTRELQRDAFRKSHPSRGVRQLLQLFMDTQ 864

  Fly   371 IFAQFIDDRLTMLNSGLGFSDEFELETVRYAEKKKRGRNYAIMKNLKDKTN 421
            :||.||.||  .|..| |....|||....|.:.........:.:.||...|
Zfish   865 MFAGFIQDR--ELRKG-GVKGLFELRAAEYLDSYPEPETSGVNRFLKGLGN 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18659NP_665880.2 uDENN 10..95 CDD:214824 29/89 (33%)
DENN 98..282 CDD:280329 53/187 (28%)
dDENN 315..379 CDD:129037 21/75 (28%)
dennd2cXP_001919086.4 uDENN <494..565 CDD:214824 23/75 (31%)
DENN 575..759 CDD:280329 53/187 (28%)
dDENN 806..873 CDD:129037 19/69 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3569
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.