DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18659 and dennd1c

DIOPT Version :9

Sequence 1:NP_665880.2 Gene:CG18659 / 35929 FlyBaseID:FBgn0027561 Length:908 Species:Drosophila melanogaster
Sequence 2:XP_017948052.1 Gene:dennd1c / 108646198 XenbaseID:XB-GENE-5962496 Length:849 Species:Xenopus tropicalis


Alignment Length:924 Identity:259/924 - (28%)
Similarity:387/924 - (41%) Gaps:184/924 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSRIKNDVKKLFEFWCEVTPTPGLERGTSSRSGGPAVPAGVIVESFPEGFRDQEVLTGIPSFAF 65
            ||||||.:..|:|:.:.||.....|::            ..|:...|||.|.||:.:|.:..|.|
 Frog     1 MGSRIKENPDKIFDGFFEVLRPTALDQ------------EPVLQMQFPEHFDDQDSVTTLTRFCF 53

  Fly    66 PCDT---TSTSVQTYSFVHTTGDSKWRFGFCRQDPRTNTAMVLITYLPWHDTFLKLLPVLAE-LR 126
            |.|.   .:.|||.:||..|......||||||....:.:.:.:::.|||.:.|.|||..:|| |.
 Frog    54 PFDVERWENPSVQHFSFTLTDLLGYQRFGFCRLSVGSRSCLCILSCLPWFEHFYKLLNNVAEYLA 118

  Fly   127 RTDPNGFRTFLSEAYNQGIPDCGGSLK----VYYSAGQSHFTFERPLQFQLPSMPENHNLNLYYN 187
            :.........|...|...:|....:|.    .|:.|         |...:|||:|||.||..:..
 Frog   119 KDQAAEIWHLLQTLYQHPVPQANTALSPEMLSYFIA---------PDPTRLPSVPENRNLTEFLV 174

  Fly   188 FVEPKEMIAVFAAMLAERRIIFTSRHLDRLSSCIQAANAFLYPMVWQHIFIPVLPWEFKDYLGAP 252
            .|:...|:.:::::|.||||:.||..|..|::|:.|:.|.||||.||||:||.||....||..||
 Frog   175 AVQVDTMLHLYSSLLCERRILITSSKLSTLTACVHASAALLYPMYWQHIYIPTLPPHLLDYCSAP 239

  Fly   253 MPYLIGVPEPVLETVTSDELGEVVILNCDTKIFESPFDDVHNLPTEIVSQLKKHLNHTHDHIGDR 317
            |||||||...::|.|....|.:|||.|.||...|:||.|:.|||..:||.||..|......:||.
 Frog   240 MPYLIGVHSSLMEKVNIKSLEDVVIFNVDTNNLETPFKDLDNLPPHVVSLLKLRLKKQCAVMGDG 304

  Fly   318 ISKIFLNALVQLIGGYRDAVEYHENSK-TFNSQKFIESRPAHLRPFLAKMMDLQIFAQFIDDRLT 381
            :|.:||.|...|.||||||::|..... :|..:.|:..:.:.:|.||...:.||:|.||||.||.
 Frog   305 LSHVFLKAQALLFGGYRDALDYTPGQPISFCQESFLSHKCSAMRSFLQNAVHLQLFTQFIDSRLE 369

  Fly   382 MLNSGLGFSDEFELETVR------------YAEKKKRGRNYAIMKNLKDKTNPAVKSAVKSVKEG 434
            .||:|.||:|.||.|...            :.|..|:|.. :::.|:|.:|:|||::.::..|..
 Frog   370 KLNAGFGFTDVFEQEITNCGLSGNSKSYQLWLENLKKGGG-SLINNVKSRTHPAVRNMLRYAKGQ 433

  Fly   435 SRGMKTAYKGFKTKLRENGNQFGGTHFHFGLGSPNHSDRPDGTSGGYVRGGKAIGAAHHSAPSSP 499
            :   ||..:|.::::::                   .|......||.:||.   |.|.|:     
 Frog   434 A---KTGLQGMRSRIKQ-------------------KDLRQLQRGGSLRGE---GGATHN----- 468

  Fly   500 VTSKRLDGIASVTGSSGSGGSGAREPREFLRRGPVPLAMSSSSSHIQPNGHAYGASAGAHYGHHL 564
              .:||.....:|...|..     .||.     |......|.:...:.|..|.|..       ..
 Frog   469 --HERLQSRLPITQHFGHS-----RPRR-----PGKKYSDSDTWDSESNPQAEGRV-------ET 514

  Fly   565 AASPAVSSASSLCSSSE-MNLSQEL----------QNHPLFKTPAVD-------------RSLKP 605
            ..:||......|....| |:|.:|:          :...|:.|.::|             :|:.|
 Frog   515 TPTPAAEDDFPLFQEEEGMDLLEEIFETLNTRAPGEERALYGTRSLDFFNLEDSQYFTRFQSINP 579

  Fly   606 NAEHRRGAAPP------------ARPP------PPQSTPASYYNHPYAAHPHVESKPPRHTSTPT 652
            .::.....:.|            ..||      |..::.:|....|..|..:.||.....||.|:
 Frog   580 TSDEDLSMSQPRDSSLWYLQEEDEEPPGFSSESPEVTSLSSEPLTPEIASLNAESLTAEDTSLPS 644

  Fly   653 RPRQPLPTADSSSFDSPPDVQSP-------------PIPPRRQ----------GSSNAIVAATAA 694
            : ..||| .|..|..:||.:.||             |.||..|          .:....|.|...
 Frog   645 K-AAPLP-GDIKSAATPPILDSPTTNNMDDVTESSLPKPPNPQVLSVTPTVQTHTQETTVPAVPE 707

  Fly   695 AVSAEISKLERNCWKDEPGNDSVRS----SNASSSSATSSSSGASFVTAASTFSHLNVSDPPIPT 755
            ::....::.|......:|......|    ....|.....|.||.|...|.|.|..|:: ||.: |
 Frog   708 SLMPPSTEEESQPATSQPATGQPASRCCKGKRESGGVAPSVSGPSVRAAISRFQTLDL-DPRM-T 770

  Fly   756 PRAKREQQQPLED--SMND---------LISLDDSNNTSFDLEDFDPLNQNARPLPPLSTAFAKK 809
            .|..|..:.|.:.  |.||         .|:.:.:.:.:....| ..:..||..|..:||     
 Frog   771 WRGNRRAENPPQRVISWNDQQLRANSPNAITKESTQSNNIPAAD-TKIGINAPNLDNIST----- 829

  Fly   810 CSTLPAGVNSSVVA 823
              ..|.||:|..|:
 Frog   830 --PQPDGVHSHKVS 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18659NP_665880.2 uDENN 10..95 CDD:214824 28/87 (32%)
DENN 98..282 CDD:280329 69/188 (37%)
dDENN 315..379 CDD:129037 26/64 (41%)
dennd1cXP_017948052.1 uDENN 9..87 CDD:214824 29/89 (33%)
DENN 90..270 CDD:214823 70/188 (37%)
dDENN 302..367 CDD:129037 26/64 (41%)
Herpes_BLLF1 <609..>841 CDD:282904 56/243 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4798
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2385
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001916
OrthoInspector 1 1.000 - - otm49462
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1448
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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