DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18659 and dennd1c

DIOPT Version :9

Sequence 1:NP_665880.2 Gene:CG18659 / 35929 FlyBaseID:FBgn0027561 Length:908 Species:Drosophila melanogaster
Sequence 2:XP_005168459.1 Gene:dennd1c / 101886409 ZFINID:ZDB-GENE-090313-329 Length:864 Species:Danio rerio


Alignment Length:885 Identity:238/885 - (26%)
Similarity:359/885 - (40%) Gaps:142/885 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSRIKNDVKKLFEFW-----CEVTPTPGLERGTSSRSGGPAVPAGVIVESFPEGFRDQEVLTGI 60
            ||||||.:..|.| :|     |.:           :|...|.|     :..|||.|.|:|....:
Zfish     1 MGSRIKKNPDKTF-YWFFQASCPI-----------ARDKDPDV-----LFQFPEDFNDEESRKSL 48

  Fly    61 PSFAFPCD----TTSTSVQTYSFVHTTGDSKWRFGFCRQDPRTNTAMVLITYLPWHDTFLKLLPV 121
            |.|.||.|    ..|.:||.::||.|..:...||||||....:.|.:.:::||||.:.|.|||..
Zfish    49 PRFCFPYDIERVKDSVAVQHFTFVLTDLEGCQRFGFCRLTSSSQTCLCILSYLPWFEVFYKLLNN 113

  Fly   122 LAEL-RRTDPNGFRTFLSEAYNQGIPDCGGSL----------------------KVYYSAGQSHF 163
            |||. .:...|.....||..|...:|...||:                      |...|||..:|
Zfish   114 LAECSSKGQTNEMTELLSALYKHPVPPANGSITLQMGAKLMIGSEMPGICGHAPKGEESAGIPYF 178

  Fly   164 TFERPLQFQLPSMPENHNLNLYYNFVEPKEMIAVFAAMLAERRIIFTSRHLDRLSSCIQAANAFL 228
            ....|.  .|||:||:.||......|:...::.::|:||.||||:.....|..|::|:.|.|..|
Zfish   179 IAPDPK--ALPSIPESRNLTELVVAVDVGNLLQLYASMLFERRILIYCSKLSTLTACVHACNGML 241

  Fly   229 YPMVWQHIFIPVLPWEFKDYLGAPMPYLIGVPEPVLETVTSDELGEVVILNCDTKIFESPFDDVH 293
            :||.||||||||||....||..||||||||:...:.|.|.|..|.:|||||.||...|||.:|:.
Zfish   242 FPMYWQHIFIPVLPPHLLDYCCAPMPYLIGIHSSLAERVKSRALEDVVILNIDTNTLESPHEDLK 306

  Fly   294 NLPTEIVSQLKKHLNHTHDHIGDRISKIFLNALVQLIGGYRDAVEY-HENSKTFNSQKFIESRPA 357
            .:|.::|:.||..|.......|..::..||.|...|.||||||::. .:....|.::.|:..:..
Zfish   307 KIPADVVAGLKVRLKRQAAAAGSGVAHAFLRAQALLFGGYRDALQAPADGPVVFCTELFLNHKSP 371

  Fly   358 HLRPFLAKMMDLQIFAQFIDDRLTMLNSGLGFSDEFELETVRYAEKKKRGRNYAIMKNLKDKTNP 422
            .:|.||...:.||.|.:|||.||.|||.|...||.||.|.::........:              
Zfish   372 SMREFLESAVHLQCFKEFIDGRLEMLNEGKEPSDVFEEELLQCGASSGGAK-------------- 422

  Fly   423 AVKSAVKSVKEGSRGMKTAYKGFKTKLRENGNQFGGTHFHFGLGSPN---HSDRPDGTSGGYVRG 484
            ..:..|.::|:|...:...:|....|         .|.:|...|..|   ..|:|:..:  ..||
Zfish   423 LCRQWVGNLKKGGGALIVTWKSTANK---------ATKYHSKFGLKNLLSSKDQPEACT--LQRG 476

  Fly   485 GKAIGAAHHSAPSSPVTSKRLDGIASVTGSSGSGGSGAREPREFLRRGPVPLAMSSSSSHIQPNG 549
            |.......:....|.....||. |....|.|.......:..|:..::.||             |.
Zfish   477 GSVCEPHTYRLIQSDCLQNRLP-ITQHFGKSRPRRPAQKHHRQKEQKTPV-------------NN 527

  Fly   550 HAYGASAGAHYGHHLAASPAVSSA-----SSLCSSSEMNLSQELQNHPLFKTPAVDRSLKPNAEH 609
            ..|..|| |......:.|..|...     |.|..:.||:|..|     :|.|.:...|.:|...:
Zfish   528 TTYEDSA-ADAVDQCSGSSDVQEEEEEDFSLLADAEEMDLLGE-----IFDTLSAQSSREPGLLY 586

  Fly   610 RRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTSTPTRPRQPLPTADSSSFDSPPDVQS 674
            ...:....|     |..:.:.:|...|:|..||..|...::.:     |.:.:....:.|.....
Zfish   587 GTRSLDLFR-----SDSSEFISHKGLANPSQESLSPSFANSGS-----LMSWEEELEEGPDGEGE 641

  Fly   675 PPIPPRRQGSSN-----------AIVAATAAAVSAEISKLERNCWKDEPGNDSVRS-----SNAS 723
            .|.....:|:.|           :|:....:  ..|:::||::.  .|.| :::||     .:||
Zfish   642 GPGGGEEEGTVNEEKGTFNEEEESIIMIDGS--ENELNELEKDL--TELG-ETLRSDLQDLEDAS 701

  Fly   724 SSSATSSSSGASFVTAASTFSHLNVSDPPIPTPRAKREQQQPLEDSMNDLISLDDSNNTSFDLED 788
            ..|:..........|..:.....::....|...|.:.:..:..|:..|:   ..|::|.....|.
Zfish   702 VESSQEVQENTQDYTQMNGTMEESLDTETIAEERTETQTDKEEEELQNE---TPDASNGHTHEES 763

  Fly   789 FD---PLNQNARPLPPLSTAFAKKCSTLPAGVNSSVVASS 825
            ..   .::|...|....:.|...|.|:..|...|.|:..|
Zfish   764 ISLKVKIDQREEPEEKSAEAQLPKVSSTVALFQSKVLVDS 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18659NP_665880.2 uDENN 10..95 CDD:214824 29/93 (31%)
DENN 98..282 CDD:280329 77/206 (37%)
dDENN 315..379 CDD:129037 22/64 (34%)
dennd1cXP_005168459.1 uDENN 9..89 CDD:214824 30/96 (31%)
DENN 93..296 CDD:214823 78/204 (38%)
dDENN 328..393 CDD:129037 22/64 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594244
Domainoid 1 1.000 132 1.000 Domainoid score I5070
eggNOG 1 0.900 - - E1_KOG3569
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001916
OrthoInspector 1 1.000 - - otm24251
orthoMCL 1 0.900 - - OOG6_103678
Panther 1 1.100 - - LDO PTHR13196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1448
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.740

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