DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE13 and Gsto2

DIOPT Version :9

Sequence 1:NP_001188889.1 Gene:GstE13 / 35928 FlyBaseID:FBgn0033381 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_080895.2 Gene:Gsto2 / 68214 MGIID:1915464 Length:248 Species:Mus musculus


Alignment Length:199 Identity:49/199 - (24%)
Similarity:78/199 - (39%) Gaps:49/199 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYYALFSPPARACILVAK-------LIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDG 63
            :|...|.|.:....||.|       :|.::|:.|| |:...:|         |..||||..:|..
Mouse    26 IYSMRFCPYSHRARLVLKAKGIRHEVININLKSKP-DWYYTKH---------PFGQIPVLENSQC 80

  Fly    64 EVYVDSHAIVC-FLVAKYAGNDQLYPRDLKRRAHIDHRMHYENGVLFQVVKDIVARNIYGGEGEY 127
            ::..:| .|.| :|...|.|. :|:|.|...||.  .:|..|   ||..|..:....:..     
Mouse    81 QLVYES-VIACEYLD
DVYPGR-KLFPYDPYERAR--QKMLLE---LFCKVPPLSKECLIA----- 133

  Fly   128 NPRSLTLCHNAYSDLEHFLQQGSFVVGNELSVADVSI---HTTLVTLDLLIPVEREKYPQTKQWM 189
                 ..|....:||:..|:|       ||...:..:   :||....|.:..::...:|    |.
Mouse   134 -----LRCGRDCTDLKVALRQ-------ELCNMEEILEYQNTTFFGGDCISMIDYLVWP----WF 182

  Fly   190 ERMD 193
            ||:|
Mouse   183 ERLD 186

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE13NP_001188889.1 GST_N_Delta_Epsilon 4..78 CDD:239343 22/79 (28%)
GST_C_Delta_Epsilon 92..211 CDD:198287 22/105 (21%)
Gsto2NP_080895.2 GST_N_Omega 6..94 CDD:239353 21/78 (27%)