DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE13 and gdap1l1

DIOPT Version :10

Sequence 1:NP_610457.1 Gene:GstE13 / 35928 FlyBaseID:FBgn0033381 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_687373.2 Gene:gdap1l1 / 562163 ZFINID:ZDB-GENE-080812-2 Length:367 Species:Danio rerio


Alignment Length:206 Identity:40/206 - (19%)
Similarity:79/206 - (38%) Gaps:38/206 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYYALFSPPARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDGEVYVDSH 70
            ||:...|..::...||....||..|.:.|.....|.....|::||...::|||:..| .:..|.:
Zfish    50 LYHWTQSFSSQKVRLVINEKGLLCEERDVSLPLTEQKEPWFMRLNLGEEVPVFIHGD-TIVSDYN 113

  Fly    71 AIVCFLVAKYAGND--QLYPRDLKRRAHIDHRMHYENGVLFQVVKDIVARNIYGGEGEYNPRSLT 133
            .|:.::...:.|:.  ||.|.:                          ...:|....:|......
Zfish   114 QIIDYIETNFVGDTVAQLIPDE--------------------------GTPMYARVQQYRELLDE 152

  Fly   134 LCHNAYSD---LEHFLQQGSFVVGNELSVADVSIHTTLVTLDLLIPVEREKYPQTKQWMERMDKL 195
            |..:||:.   |...|...|.:  .:.:.|::..|......:|: .::.|:...|:.::.:..||
Zfish   153 LPMDAYTHGCILHPELTTDSMI--PKYATAEIRRHLANAASELM-KLDHEEPQLTEPYLSKQKKL 214

  Fly   196 LP---DNEEIN 203
            :.   |::.:|
Zfish   215 MAKILDHDNVN 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE13NP_610457.1 GstA 5..192 CDD:440390 36/190 (19%)
gdap1l1XP_687373.2 None

Return to query results.
Submit another query.