DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE13 and Gsto2

DIOPT Version :9

Sequence 1:NP_001188889.1 Gene:GstE13 / 35928 FlyBaseID:FBgn0033381 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001012071.1 Gene:Gsto2 / 309465 RGDID:1310764 Length:248 Species:Rattus norvegicus


Alignment Length:211 Identity:51/211 - (24%)
Similarity:80/211 - (37%) Gaps:73/211 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYYALFSPPARACILVAK-------LIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDG 63
            :|...|.|.:....||.|       :|.::|:.|| |:...:|         |..|:||..:|..
  Rat    26 IYSMRFCPYSHRTRLVLKAKSIRHEIININLKNKP-DWYYTKH---------PFGQVPVLENSQC 80

  Fly    64 EVYVDSHAIVC-FLVAKYAGNDQLYPRDLKRRAHIDHRMHYENGVLF----QVVKDIVARNIYGG 123
            ::..:| .|.| :|...:.|. :|:|.|...||.  .:|..|   ||    |:.|:.:.....| 
  Rat    81 QLIYES-VIACEYLD
DVFPGR-KLFPYDPYERAR--QKMLLE---LFCKVPQLSKECLVALRCG- 137

  Fly   124 EGEYNPRSLT---------LCHNAYSDLEHFL--QQGSFVVGNELSVADVSIHTTLVTLDLLIPV 177
                  |..|         ||     :||..|  |..:|..|:.:|:.|..:             
  Rat   138 ------RDCTDLKVALRQELC-----NLEEILEYQNTTFFGGDSISMIDYLV------------- 178

  Fly   178 EREKYPQTKQWMERMD 193
                :|    |.||:|
  Rat   179 ----WP----WFERLD 186

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE13NP_001188889.1 GST_N_Delta_Epsilon 4..78 CDD:239343 21/79 (27%)
GST_C_Delta_Epsilon 92..211 CDD:198287 26/117 (22%)
Gsto2NP_001012071.1 GST_N_Omega 7..94 CDD:239353 20/78 (26%)