DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and SIZ1

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_010697.3 Gene:SIZ1 / 852018 SGDID:S000002817 Length:904 Species:Saccharomyces cerevisiae


Alignment Length:534 Identity:132/534 - (24%)
Similarity:221/534 - (41%) Gaps:120/534 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLELLAPKVQEVYAQSVQEQNA 107
            :|...::::|:|.||:.|...::...:|||..||..|.:||:.  .|:..|......|:|:....
Yeast    28 EETITLMELLKVSELKDICRSVSFPVSGRKAVLQDLIRNFLQN--ALVVGKSDPYRVQAVKFLIE 90

  Fly   108 TLQYIDPTRMYSHI------------------QLPPTVQPNPVGLVGSGQGVQVPGGQMNVVGGA 154
            .::..:|..:|..:                  :.|||||.            |.|    :|:..:
Yeast    91 RIRKNEPLPVYKDLWNALRKGTPLSAITVRSMEGPPTVQQ------------QSP----SVIRQS 139

  Fly   155 PF----LHTHSINSQL--PIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFY--FTLTP 211
            |.    ..|.|..|:.  |.:||......:|            .||  |...:|.|||  ..|.|
Yeast   140 PTQRRKTSTTSSTSRAPPPTNPDASSSSSSF------------AVP--TIHFKESPFYKIQRLIP 190

  Fly   212 Q--QATEIASNRDIRNS----SKVEHAI----QVQLRFCL-------VETSCDQEDCFP-PNV-- 256
            :  ...|:...|.:.::    ||.::.:    ..:.|..|       :.:..::...|| ||.  
Yeast   191 ELVMNVEVTGGRGMCSAKFKLSKADYNLLSNPNSKHRLYLFSGMINPLGSRGNEPIQFPFPNELR 255

  Fly   257 --NVKVNNKLCQLPNVIPTNRP-NVEPKRPPRPVNVTSNVKLSPTVTNTITVQWCPDYTRSYCLA 318
              ||::.:.:....:...|.:| ::.|..  :|....:||:|....|           |:.|.|.
Yeast   256 CNNVQIKDNIRGFKSKPGTAKPADLTPHL--KPYTQQNNVELIYAFT-----------TKEYKLF 307

  Fly   319 VYLVKKLTSTQLLQRM--KTKGVKPADYTRGLIKEKLTEDADCEIATTMLKVSLNCPLGKMKMLL 381
            .|:|:.:|..|||:::  ..|.:|.|  |...:|:.|.||.:..:.||...:||.||:...:|..
Yeast   308 GYIVEMITPEQLLEKVLQHPKIIKQA--TLLYLKKTLREDEEMGLTTTSTIMSLQCPISYTRMKY 370

  Fly   382 PCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQ 446
            |.::..|.|||||||..:|....:.|||.||||......:||.|..:..::|.:  .:.:..:::
Yeast   371 PSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDILQN--CQKNVEQVE 433

  Fly   447 LHQDGSWSTPGLRSETQILDTPSKPAQKVEVISDDIELISDDAKPVKRDLSPAQDEQPTSTSNSE 511
            |..||.|        |.||:.           .||.:..|:|........:...|...:|:..||
Yeast   434 LTSDGKW--------TAILED-----------DDDSDSDSNDGSRSPEKGTSVSDHHCSSSHPSE 479

  Fly   512 TVDLTLSDSDDDMP 525
            .:.:.| |||||.|
Yeast   480 PIIINL-DSDDDEP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 11/33 (33%)
PINIT 171..307 CDD:291022 31/160 (19%)
zf-MIZ 368..417 CDD:280964 22/48 (46%)
SIZ1NP_010697.3 SAP 34..68 CDD:128789 11/33 (33%)
PINIT 176..311 CDD:405075 30/147 (20%)
SP-RING_ScSiz_like 358..405 CDD:319707 22/46 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343827
Domainoid 1 1.000 57 1.000 Domainoid score I2648
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I1340
Isobase 1 0.950 - 0 Normalized mean entropy S2460
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 1 1.000 - - otm46565
orthoMCL 1 0.900 - - OOG6_102691
Panther 1 1.100 - - O PTHR10782
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 1 1.000 - - X350
TreeFam 1 0.960 - -
1413.730

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