DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and Pias3

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_113972.2 Gene:Pias3 / 83614 RGDID:708413 Length:628 Species:Rattus norvegicus


Alignment Length:590 Identity:233/590 - (39%)
Similarity:329/590 - (55%) Gaps:72/590 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLELLAP----KVQEVYAQSVQE 104
            |.:.||...||.|||.:|.|...:.:|||.:|.::.|..|:::   .||    |::|:|.:....
  Rat     6 ELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSS---CAPSVQMKIKELYRRRFPR 67

  Fly   105 QNATLQYIDPTRMYSHIQLPPTVQP--NPVGLVGSGQGVQVPGGQMNVVGGAPFLHTHSINSQLP 167
            :.     :.|:.: |.:.|||...|  :|..|......:..||   .::|....:..|....| |
  Rat    68 KT-----LGPSDL-SLLSLPPGTSPVGSPSPLASIPPTLLTPG---TLLGPKREVDMHPPLPQ-P 122

  Fly   168 IHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATEIASNRDIRNSSKVEHA 232
            :||||.:|.|.||:|.|.||:|:||...::||.:|..|.|.|||||..:|.::|::...:|.::.
  Rat   123 VHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQLQQILTSREVLPGAKCDYT 187

  Fly   233 IQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVKLSP 297
            |||||||||.||||.|||.||||:.||||.|||.||..:|..:...|||||.||:|:|...:||.
  Rat   188 IQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPINITPLARLSA 252

  Fly   298 TVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEKLTEDADCEIA 362
            ||.|||.|.|..::.|:|.|:||||::||:..|||:::.||::..|::|.|||||||.|.|.|:|
  Rat   253 TVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRALIKEKLTADPDSEVA 317

  Fly   363 TTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAIYDNLVIDG 427
            ||.|:|||.||||||::.:||||.||:|||.|||:|||||||:||||.||||||.|.|::|:|||
  Rat   318 TTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDG 382

  Fly   428 YFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQKVEVIS-------DDIELI 485
            .|.|:|.|.   ||..|||..:||||             .|.||.::...:.       |.::  
  Rat   383 LFMEILNSC---SDCDEIQFMEDGSW-------------CPMKPKKEASEVCPPPGYGLDGLQ-- 429

  Fly   486 SDDAKPVKRDLSPAQD-EQPTSTSNSETVDLTLSDSDD--DMPLAKRRPPAKQAVASSTSNGSGG 547
                      .||.|: .|..:....|.:|||:..|.|  |:|..|:..|    |.|:......|
  Rat   430 ----------YSPVQEGNQSENKKRVEVIDLTIESSSDEEDLPPTKKHCP----VTSAAIPALPG 480

  Fly   548 GQRAYTPAQQPQQSESPEQQASRQSPEKQTVSEQQLQQ-QQHEQPATAAVHASL--LESLAAAVA 609
            .:.|.|...||        .:..:||...|:....|.. ..||.|....:.|.:  |:..:....
  Rat   481 SKGALTSGHQP--------SSVLRSPAMGTLGSDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQT 537

  Fly   610 DQKHF 614
            :.:|:
  Rat   538 ESQHY 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 13/33 (39%)
PINIT 171..307 CDD:291022 73/135 (54%)
zf-MIZ 368..417 CDD:280964 37/48 (77%)
Pias3NP_113972.2 Interaction with CCAR2. /evidence=ECO:0000250|UniProtKB:Q9Y6X2 1..200 73/206 (35%)
SAP 11..>36 CDD:128789 11/24 (46%)
LXXLL motif 19..23 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95 8/23 (35%)
PINIT 126..263 CDD:291022 73/136 (54%)
zf-MIZ 323..371 CDD:280964 36/47 (77%)
SUMO1-binding. /evidence=ECO:0000250 450..460 4/9 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..618
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340873
Domainoid 1 1.000 172 1.000 Domainoid score I3620
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 397 1.000 Inparanoid score I1890
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205949at2759
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 1 1.000 - - otm44659
orthoMCL 1 0.900 - - OOG6_102691
Panther 1 1.100 - - O PTHR10782
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X350
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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