DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and AT5G41580

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_198973.3 Gene:AT5G41580 / 834160 AraportID:AT5G41580 Length:760 Species:Arabidopsis thaliana


Alignment Length:418 Identity:97/418 - (23%)
Similarity:170/418 - (40%) Gaps:77/418 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 DIRNSSKVEHAIQVQLRFCLVET-SCDQEDCF--PPNVNVKVNNKLCQLPNVIPTNRPNVEPKRP 283
            |...|..:.|::|.::|..:.:| :.|...|.  ||.|:..:|.|..:       .|.|:.....
plant   182 DFYISKNMPHSLQEKIRLFVAQTDNIDTSACISNPPEVSFLLNGKGVE-------KRVNIAMDTG 239

  Fly   284 PR-PVNVTSNVKLSPTVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPA--DYT 345
            |: |.|||:.:|..   ||.:.|.  .::..:|.:.:.....:...:          ||.  ||.
plant   240 PQLPTNVTAQLKYG---TNLLQVM--GNFKGNYIIIIAFTGLVVPPE----------KPVLKDYL 289

  Fly   346 R-GLIKEKLTEDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTW 409
            : |:|:    ...|.:|.....:|||:||:.:.::.||.:...|.||||||.|.|:.:|.|.|||
plant   290 QSGVIE----ASPDSDIIEGPSRVSLSCPISRKRIKLPVKGQLCKHLQCFDFSNYVHINMRNPTW 350

  Fly   410 NCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSET--------QILD 466
            .||.|::|..|.::.:|....::|..  ::.:..::.:...|:|.......||        ..|:
plant   351 RCPHCNQPVCYPDIRLDQNMAKILKD--VEHNAADVIIDAGGTWKVTKNTGETPEPVREIIHDLE 413

  Fly   467 TPSKPAQKVEVISD-------DIELISD----DAKPVKRDLSPAQDEQPTSTSNS---------- 510
            .|........|:.|       ::|:..|    |.||.   :|.||.:...:.:|.          
plant   414 DPMSLLNSGPVVFDLTGDDDAELEVFGDNKVEDRKPC---MSDAQGQSNNNNTNKHPSNDDYSSI 475

  Fly   511 -ETVDLTLSDSDDDMPLAKRRPPAKQAVASSTSNGSGGGQRAYTPAQQPQQSES---PEQQASRQ 571
             :..|:...|.:....|....|...||      :.:|.||:....:|.|...:.   |...:...
plant   476 FDISDVIALDPEILSALGNTAPQPHQA------SNTGTGQQYSNLSQIPMSIDPMPVPVPFSQTP 534

  Fly   572 SPEKQTVSEQQLQQQQHEQPATAAVHAS 599
            ||..:..:...:....:..|..:.||||
plant   535 SPRDRPATTSTVFTIPNPSPQYSQVHAS 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 171..307 CDD:291022 24/88 (27%)
zf-MIZ 368..417 CDD:280964 24/48 (50%)
AT5G41580NP_198973.3 SP-RING_PIAS_like 310..357 CDD:319564 23/46 (50%)
Herpes_BLLF1 <531..758 CDD:282904 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I2258
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10782
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X350
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.960

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