DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and pias2

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_031757544.1 Gene:pias2 / 779910 XenbaseID:XB-GENE-988474 Length:621 Species:Xenopus tropicalis


Alignment Length:622 Identity:238/622 - (38%)
Similarity:332/622 - (53%) Gaps:72/622 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLE-LLAPKVQEVYAQSVQEQN 106
            :|...||...||.|||.:|.|...:.:|||.||..|.|..|:.... .:..|::|:|.:......
 Frog     5 EELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKNGCSPAVQIKIKELYRRRFPRTL 69

  Fly   107 ATLQYIDPTR--------------------MYSHIQLPPT-VQP-NPVGLVGSGQGVQVPGGQMN 149
            ..:..:.|.|                    |:|   ||.| |.| :|...:||   |.:...:  
 Frog    70 DGVTGLAPIRSNVFNLDSSAPVDPDLAVSGMHS---LPSTSVSPCSPASPLGS---VLLQDTK-- 126

  Fly   150 VVGGAPFLHTHSINSQLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQA 214
                |||.......|..|:||||.||.|.|||||..||||::||....||.||..|.|.|||||.
 Frog   127 ----APFEIQQLSPSIPPVHPDVHLKSLPFYDVLDVLIKPTSLVQNTLQRFQEKFFIFALTPQQV 187

  Fly   215 TEIASNRDIRNSSKVEHAIQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVE 279
            .|:..:||.....:.::::|||||.||.||||.|||.:|.::.:|||.||..||......:..||
 Frog   188 REVVISRDYMPGGRRDYSVQVQLRLCLAETSCPQEDNYPSSLCIKVNGKLFPLPGCAVPPKNGVE 252

  Fly   280 PKRPPRPVNVTSNVKLSPTVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADY 344
            .|||.||:|:||.|:||..|.|.:::.|..:..::|.::||||::|||..|||::|.||::..|:
 Frog   253 QKRPGRPLNITSLVRLSSAVPNQVSISWASEIGKNYSMSVYLVRQLTSAVLLQKLKMKGIRNPDH 317

  Fly   345 TRGLIKEKLTEDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTW 409
            :|.|||||||.|.|.|||||.|:|||.||||||::.:||||.||||||||||:|||||||:||||
 Frog   318 SRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRAVTCSHLQCFDAALYLQMNEKKPTW 382

  Fly   410 NCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQK 474
            .||||||.|.|::|:|||.|.|:|...   ||..||:..|||||..  :|.:.:.:.:||.....
 Frog   383 ICPVCDKKASYESLIIDGLFMEILNQC---SDVDEIKFQQDGSWCP--MRPKKEPMTSPSTQYPH 442

  Fly   475 VEVISDDIELISDDAKPVKRDLSPAQDEQPTSTSNSETVDLTL-SDSDDDMPLAKRRPPAKQAVA 538
            :|           .|..:.:..|..:..:.|..:.:|.:|||| |.||||      .||||:...
 Frog   443 IE-----------GAGVISKICSAVEGGETTRKNKAEVIDLTLESSSDDD------EPPAKKECV 490

  Fly   539 SSTSNGSGG--GQRAYTPAQQPQQSESPEQQASRQSPEKQTVSEQQLQQQQH-EQPATAAVHASL 600
            ..|.:....  |..:|.|        |..:.......|.:.:.........| ..||.|.:.|.|
 Frog   491 YLTESQEAAMKGVLSYQP--------SSIRVGKVAGIESEPMHPSMAGYADHFHHPAIAGISAEL 547

  Fly   601 --LESLAAAVAD-QKHFQLLDLAAVAAAAAATASSGQ 634
              |:.|:....| |:::..:.|.::.:|...:..:|:
 Frog   548 PGLDFLSLVSMDPQQYYPPMFLDSLTSAMPTSHVTGK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 15/33 (45%)
PINIT 171..307 CDD:291022 67/135 (50%)
zf-MIZ 368..417 CDD:280964 39/48 (81%)
pias2XP_031757544.1 SAP 11..45 CDD:128789 15/33 (45%)
PINIT 146..295 CDD:405075 69/148 (47%)
SP-RING_PIAS 342..389 CDD:319704 37/46 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3491
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 390 1.000 Inparanoid score I1954
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205949at2759
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 1 1.000 - - otm47702
Panther 1 1.100 - - O PTHR10782
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X350
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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