DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and ZMIZ1

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_005270044.1 Gene:ZMIZ1 / 57178 HGNCID:16493 Length:1073 Species:Homo sapiens


Alignment Length:560 Identity:127/560 - (22%)
Similarity:194/560 - (34%) Gaps:168/560 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 PTRMYSHIQLP--PTVQPNPVGLVGSGQGVQVPGGQMNVVGGAPFLHTHSINSQLPIHPDVRLKK 176
            |...|.|..:|  ||....|        |..:|          |:| :.|.:.:.|..||     
Human   509 PVANYPHSPVPGNPTPPMTP--------GSSIP----------PYL-SPSQDVKPPFPPD----- 549

  Fly   177 LAFYDVLGTLIKP--STLVPRNTQRVQEVPFYFTLTPQQATEIASNRD--IRNSSKVEHAIQV-- 235
                      |||  |.|.|.......|:...|.:           ||  :....::||.:.|  
Human   550 ----------IKPNMSALPPPPANHNDELRLTFPV-----------RDGVVLEPFRLEHNLAVSN 593

  Fly   236 ---QLRFCLVETSCDQED------CF-----------PPNVNVKVNNKLCQLPNVIPTNRPNVEP 280
               .||..:.:|...:.|      |:           |.:|.|.|                |..|
Human   594 HVFHLRPTVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSV----------------NATP 642

  Fly   281 KRPPRPVNVTSNVKL------SP---TVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKT 336
            ....|..|.||:..|      .|   |:..|:|...|     |:...:.||.:.:...:||.:..
Human   643 LTIERGDNKTSHKPLHLKHVCQPGRNTIQITVTACCC-----SHLFVLQLVHRPSVRSVLQGLLK 702

  Fly   337 KGVKPADYTRGLIKEKL----------TEDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHL 391
            |.:.||::....||...          |.:.:..:..|.:||||.||:...::.||.|...|.|:
Human   703 KRLLPAEHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHV 767

  Fly   392 QCFDASLYLQMNERKPTWNCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTP 456
            ||||...|||:|..:.||.||||:|.|:.:.|.:|.|...:| :::..|:..|:.:....||...
Human   768 QCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGIL-NAIQHSEFEEVTIDPTCSWRPV 831

  Fly   457 GLRSETQILDTPSKPAQKVEVISDDIELISDDAKPVKR--DLSPAQDEQPTSTSNSETVDLTLSD 519
            .::|:..|.|.|                   |..|.||  .:||:|...|    |...:...|..
Human   832 PIKSDLHIKDDP-------------------DGIPSKRFKTMSPSQMIMP----NVMEMIAALGP 873

  Fly   520 SDDDMPLAKRRPPAKQAVASSTSNGSGGGQRA--------------------YTPAQQPQQSESP 564
            .....||    ||......|:..:..|...:.                    :.|.|.....:.|
Human   874 GPSPYPL----PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMP 934

  Fly   565 EQQASRQSPEKQTVSEQQLQQQQHEQPATAAVHASLLESL 604
            ...|:.:.|....:.|........:||     |.|:.:.|
Human   935 NNMAALEKPLSHPMQETMPHAGSSDQP-----HPSIQQGL 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 171..307 CDD:291022 34/170 (20%)
zf-MIZ 368..417 CDD:280964 24/48 (50%)
ZMIZ1XP_005270044.1 Zmiz1_N 8..100 CDD:375500
Med15 184..>563 CDD:312941 21/87 (24%)
SP-RING_ZMIZ 745..792 CDD:319705 23/46 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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