DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and pias1a

DIOPT Version :10

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_692921.4 Gene:pias1a / 564496 ZFINID:ZDB-GENE-120727-5 Length:651 Species:Danio rerio


Alignment Length:617 Identity:249/617 - (40%)
Similarity:345/617 - (55%) Gaps:91/617 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLE-LLAPKVQEVYAQSVQEQNA 107
            |.:|||..|||.|||.:|.:...:..|||.:|.::.|..|:.... .:..|::|:|.:..     
Zfish     6 ELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKELYRRRF----- 65

  Fly   108 TLQYIDPTRMYSHIQLP-PTVQPN---PVGLVGSG-QGVQVPGGQM---NVVG-----GAPFLHT 159
                  ||::.|..:|. |.|.|.   |.||...| .|...|...:   :::|     |.|.|.|
Zfish    66 ------PTKLVSPAELALPGVHPAASLPPGLTQLGFDGHGAPPSPLLPISLLGPKHELGLPHLPT 124

  Fly   160 --HSINSQLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATEIASNRD 222
              |      |:||||:|::|.|||:|..||||::|...|:||.||..|.|.|||||..:::|:.|
Zfish   125 NLH------PVHPDVKLQRLPFYDLLDELIKPTSLASDNSQRFQETCFAFALTPQQVQQVSSSMD 183

  Fly   223 IRNSSKVEHAIQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPV 287
            | :.:|.:..:||||||||.||||.|||.||||:.||||.|.|.||..:|..:..||||||.||:
Zfish   184 I-SGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNGKPCNLPGYLPPTKNGVEPKRPSRPI 247

  Fly   288 NVTSNVKLSPTVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEK 352
            |:||.::||.||.|||.|.|..:..|||.|||||||:|:||.||||::.||::..|::|.|||||
Zfish   248 NITSLIRLSTTVPNTIVVSWTSEIGRSYSLAVYLVKQLSSTMLLQRLRGKGIRNPDHSRALIKEK 312

  Fly   353 LTEDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKP 417
            ||.|.|.|||||.|:|||.||||||::::||||.||||||||||:||:||||:||||.||||||.
Zfish   313 LTADPDSEIATTSLRVSLLCPLGKMRLMIPCRALTCSHLQCFDATLYIQMNEKKPTWVCPVCDKK 377

  Fly   418 AIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQKVEVISDDI 482
            |.|::|:|||.|.|:|.|.|   |..|||..:||||:             |.:..::|:.:|...
Zfish   378 APYEHLIIDGLFMEILNSCL---DCDEIQFKEDGSWA-------------PMRSKKEVQEVSASY 426

  Fly   483 ELISDDAKPVKRDLSPAQDEQPTSTSNS------ETVDLTLSDS----DDDMPLAKRRPPAKQAV 537
            ..|....:....:    |:.|...:|..      |.:||||..|    :|:.||.|:..|:..::
Zfish   427 NGIDGGCRTSVLE----QNSQTNGSSGGGNRKKVEVIDLTLDSSSEEEEDEEPLPKKSCPSLSSL 487

  Fly   538 ASSTSNGSGGGQRAYTPAQQPQQSESPEQQASRQSPEKQTVSEQQ-----------------LQQ 585
            :....||.....|..:|..  :....|:...|...|....:.:.:                 ||.
Zfish   488 SPQMDNGVLNLHRQASPVS--RTPSMPQVDTSYIPPPPPLIQDYRHYYSTPTELSDLNFFPFLQG 550

  Fly   586 QQHEQPATAAVHASLLESLAAAVADQKHFQLL 617
            :.|:       |.:::.: |||.|.:.|..||
Zfish   551 ENHQ-------HYNMVMA-AAASASEDHDLLL 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 13/33 (39%)
PINIT 175..323 CDD:464136 82/147 (56%)
SP-RING_PIAS 369..416 CDD:438444 36/46 (78%)
pias1aXP_692921.4 None

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