DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and zmiz1a

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_005156910.1 Gene:zmiz1a / 561061 ZFINID:ZDB-GENE-080220-27 Length:1080 Species:Danio rerio


Alignment Length:615 Identity:139/615 - (22%)
Similarity:215/615 - (34%) Gaps:183/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 QSVQEQNATLQYIDPTRMYSHIQLPPTVQP-------NPVGLVGSGQGVQVPGG-----QMNVVG 152
            |.:..|.:|.||            |||..|       .|.    :||.....||     |.|   
Zfish   465 QRMPGQQSTGQY------------PPTGVPMGQYYKQEPF----NGQNNNFSGGGYGYSQGN--- 510

  Fly   153 GAPFLHTHSINSQLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEV--PFYFTLTPQQAT 215
            |.|....:..:|.:|.:|...:             .|.:.:|......|:|  ||...:.|...:
Zfish   511 GPPRQVVNYPHSPVPGNPTPPM-------------TPGSSIPPYLSPSQDVKPPFPPDMKPNMTS 562

  Fly   216 ----------EIASNRDIRNS-----SKVEHAIQV-----QLRFCLVETSCDQED------CF-- 252
                      |:.....:|:.     .::||.:.|     .||..:.:|...:.|      |:  
Zfish   563 LPPPPNNPNEELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPSVHQTLMWRSDLELQFKCYHH 627

  Fly   253 ---------PPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVKL------SP---TV 299
                     |.:|.|.|                |..|....|..|.||:..|      .|   |:
Zfish   628 EDRQMNTNWPASVQVSV----------------NATPLTIERGDNKTSHKPLHLKHVCQPGRNTI 676

  Fly   300 TNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEKL----------T 354
            ..|:|...|     |:...:.||.:.:...:||.:..|.:.||::....||...          |
Zfish   677 QITVTACCC-----SHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASTGNAT 736

  Fly   355 EDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAI 419
            .:.:..:..|.:||||.||:...::.||.|...|.|:||||...|||:|..:.||.||||:|.|:
Zfish   737 LNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPVCNKTAL 801

  Fly   420 YDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKP-AQKVEVISDDIE 483
            .:.|.:|.|...:| :::..|:..|:.:....||....::|:..|.:.|..| |::.:.:|.. :
Zfish   802 LEGLEVDQYMWGIL-NAIQNSEFEEVNIDPTCSWRPVPIKSDIHIKEDPDGPLAKRFKTMSPS-Q 864

  Fly   484 LISDDAKPVKRDLSPAQD-------------------------------EQPTSTSN-------- 509
            :|..:...:...|.|...                               :.|.|.|.        
Zfish   865 MIMPNVMDMIAQLGPGPSPYTPLPPQHGGNNGEYGGQGRGNSYQGHGNFDFPHSNSGGGAPMNDF 929

  Fly   510 ------SETVDLTLSDSDDDMPLAKRRP---PAKQAVASSTSNGSGGGQRAYTPAQQPQQ----S 561
                  |...|:..|....|.|||...|   |...:...|.::...|...:..|..|..|    |
Zfish   930 MHGPQLSHPPDVPNSLMGPDKPLAHGMPDTMPHPVSADQSHASMQPGMHASPHPNSQSAQPLHHS 994

  Fly   562 ESPEQQASRQSPEKQTVSEQQLQQQQHEQP 591
            ..|..|..||.|     |:||..|..|..|
Zfish   995 GPPSSQPPRQPP-----SQQQPSQNTHPHP 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 171..307 CDD:291022 32/183 (17%)
zf-MIZ 368..417 CDD:280964 24/48 (50%)
zmiz1aXP_005156910.1 CITED 336..>463 CDD:282356
zf-MIZ 750..798 CDD:280964 24/47 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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