DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and Zmiz2

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_082877.2 Gene:Zmiz2 / 52915 MGIID:106374 Length:920 Species:Mus musculus


Alignment Length:609 Identity:143/609 - (23%)
Similarity:215/609 - (35%) Gaps:186/609 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 YAQSVQEQNATLQYI-------DPTRMYSHIQLP-------PTVQPNPVGL------VGSGQGVQ 142
            |.|..|....|.||.       .|...|:..:||       ....|.|.||      ..:|||..
Mouse   278 YLQGGQYAANTAQYAPGPGQPPGPASSYAGHRLPLQQGMAQSLSAPGPTGLHYKPTEQFNGQGAS 342

  Fly   143 VPGGQMNV-----------VGGAPFLHTHSINSQLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRN 196
            ..||.::.           :.|.|       :|.||.:|...:             .||:.||..
Mouse   343 FNGGSISYSQPGLSGPSRSIPGYP-------SSPLPGNPTPPM-------------TPSSNVPYM 387

  Fly   197 TQRVQEV--PFYFTLTPQQAT------------EIASNRDIRNS-----SKVEHAIQV-----QL 237
            :.. |||  ||...|.|..::            |:.....:|:.     .:::|.:.|     ||
Mouse   388 SPS-QEVKSPFLPDLKPGLSSLHPSPSASVHCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQL 451

  Fly   238 RFCLVETSCDQED------CF-----------PPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPR 285
            |..:.:|...:.|      |:           |.:|.|.|                |..|....|
Mouse   452 RDSVYKTLMLRPDLELQFKCYHHEDRQMNTNWPASVQVSV----------------NATPLSIER 500

  Fly   286 PVNVTSNVKL------SP---TVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKP 341
            ..|.||:..|      .|   |:..|:|...|     |:...:.||.:.:...:||.:..|.:.|
Mouse   501 GDNKTSHKPLYLKHVCQPGRNTIQITVTACCC-----SHLFVLQLVHRPSVRSVLQGLLKKRLLP 560

  Fly   342 ADYTRGLIKEKLT------------EDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCF 394
            |::....||...:            ||.   :..|.:||||.||:...::.||.|...|.|:|||
Mouse   561 AEHCITKIKRNFSSGTIPGTPGPNGEDG---VEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCF 622

  Fly   395 DASLYLQMNERKPTWNCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLR 459
            |...|||:|..:.||.||||:|.|:.:.|.:|.|...:| ..:..||..||.:....||....::
Mouse   623 DLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGIL-IYIQNSDYEEITIDPTCSWKPVPVK 686

  Fly   460 SETQILDTPSKPAQKVEVISDDIELISDDAKPVKRDLSPAQDEQPTSTSNSETVDLTLSDSDDDM 524
            .:..|.:.|..|..|                 ..|.:|||....|:      .:::..:......
Mouse   687 PDLHIKEEPDGPVLK-----------------RCRTVSPAHVLMPS------VMEMIAALGPGAA 728

  Fly   525 PLAKRRPPAKQAVASSTSNGS---GGGQ---------------RAYTPAQQP--QQSESPEQQAS 569
            |.|..:||:....:...|.||   |.|.               ..:|....|  .||:.|   :|
Mouse   729 PFAPLQPPSAPTPSDYPSQGSNFMGPGTFPESFPSATPTTPNLAEFTQGPPPISYQSDIP---SS 790

  Fly   570 RQSPEKQT-VSEQQLQQQQHEQPA 592
            ..:|:|.| ....|:....|..||
Mouse   791 LLTPDKSTPCLPGQMAPAGHLDPA 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 171..307 CDD:291022 36/185 (19%)
zf-MIZ 368..417 CDD:280964 24/48 (50%)
Zmiz2NP_082877.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..262
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..308 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..408 26/111 (23%)
Interaction with AR. /evidence=ECO:0000250 435..506 16/86 (19%)
SP-RING_ZMIZ 597..644 CDD:319705 23/46 (50%)
SP-RING finger 600..642 CDD:319705 19/41 (46%)
PHA03307 714..>887 CDD:223039 23/110 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..920 20/86 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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