DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and pias4a

DIOPT Version :10

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_998568.2 Gene:pias4a / 406712 ZFINID:ZDB-GENE-040426-2734 Length:505 Species:Danio rerio


Alignment Length:550 Identity:191/550 - (34%)
Similarity:274/550 - (49%) Gaps:88/550 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNL--ELLAPKVQEVYAQSVQEQN 106
            |...||:..||.:||.:|:.:..|.:|.|.||..|.|..::|..  ||| ..|:::|.....:.:
Zfish     7 EAMNMVKSFRVSDLQTLLASMGRSKSGLKQDLVGRALRLVQTEYSPELL-KNVRQLYETRFPKAS 70

  Fly   107 ATLQYIDPTRMYSHIQLPPTVQPNPVGL----VGSGQGVQVPGGQMNVVGGAPFLHTHSINSQLP 167
            |.|.          .:.|.||..|...|    .|:|||.....|   :...||           |
Zfish    71 AWLA----------ARRPETVAVNYPALNSSPRGTGQGTDYLNG---IPKPAP-----------P 111

  Fly   168 IHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATEIASNRDIRNSSKVEHA 232
            ...:|:|..|.||..|.||:.|:.||.:|::::||....|.|||.|..:|.::.::|...|   :
Zfish   112 PAAEVKLVPLPFYHNLETLLPPTELVAQNSEKLQESQCVFDLTPNQVDQIRNSSELRPGMK---S 173

  Fly   233 IQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVKLSP 297
            :||.||.|..::...|||.:|||:.||||...|.:|...|:|:|.|||:||.||||:|..:.|| 
Zfish   174 VQVVLRICYTDSIGVQEDQYPPNIAVKVNQSYCHVPGYYPSNKPGVEPRRPCRPVNITPWLHLS- 237

  Fly   298 TVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEKLTEDADCEIA 362
            ||||.:|:.| .::.:.|.:|||||:..||.:|..::|...|:..|..|..|::||..|.:.|||
Zfish   238 TVTNRVTITW-GNFGKRYSVAVYLVRVFTSGELFNQLKHCSVENPDRCRERIQDKLRFDPESEIA 301

  Fly   363 TTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAIYDNLVIDG 427
            ||.|:|||.|||.||::.:|||..||:|||||||..:|||||:||||.||||||||.::.|.|||
Zfish   302 TTGLRVSLICPLVKMRLGVPCRVLTCAHLQCFDAVFFLQMNEKKPTWTCPVCDKPAPFELLTIDG 366

  Fly   428 YFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQKVEVISDDIELISDDAKPV 492
            ...|:|..:  ..|..||:...||||                                    :|:
Zfish   367 LLSEILKET--PEDVEEIEYLTDGSW------------------------------------RPI 393

  Fly   493 KRDLSPAQDEQPTSTSNSETVDLTLSDSDDDMP-------LAKRRPPAKQAVASSTSNGSGGGQR 550
            :.|....::.:.:.|.:...||:.:.:::...|       ..|.......|...|||.|||||..
Zfish   394 RDDKEKERERENSRTPDYPVVDICVPEANGHSPAHSGTNQTGKSGSGGASAGTGSTSGGSGGGTV 458

  Fly   551 AYTPAQQPQQSE-------SPEQQASRQSP 573
            .........:.|       |.|...|:.||
Zfish   459 VDLTLDDSSEEEGGGGAEDSEETDDSQDSP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 13/33 (39%)
PINIT 175..323 CDD:464136 63/147 (43%)
SP-RING_PIAS 369..416 CDD:438444 32/46 (70%)
pias4aNP_998568.2 SAP 12..46 CDD:128789 13/33 (39%)
LXXLL motif. /evidence=ECO:0000250|UniProtKB:Q8N2W9 20..24 2/3 (67%)
PINIT 119..262 CDD:464136 63/147 (43%)
SP-RING_PIAS4 303..360 CDD:438470 39/56 (70%)
Required for nuclear localization. /evidence=ECO:0000269|PubMed:22345667 374..505 28/152 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..505 20/93 (22%)

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