DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and Pias4

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001094227.1 Gene:Pias4 / 362827 RGDID:1308737 Length:507 Species:Rattus norvegicus


Alignment Length:540 Identity:208/540 - (38%)
Similarity:300/540 - (55%) Gaps:89/540 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLE-LLAPKVQEVYAQSVQEQNA 107
            |.:.||...||.:||.:|.|:..|.:|.|.:|.:|.|..::.:.. .|..|::|:|.....:::|
  Rat     7 EAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKELYETRYAKKSA 71

  Fly   108 -----TLQYIDPTRMYSHIQLPPTVQPNPVGLVGSGQGVQVP---GGQMNVVGGAPFLHTHSINS 164
                 ..:.:||..::|   :|.|    |:    ||..|..|   |..:|.:|..|   |.::. 
  Rat    72 EPGPQAPRPLDPLALHS---MPRT----PL----SGPTVDYPVLYGKYLNGLGRLP---TKALK- 121

  Fly   165 QLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATEIASNRDIRNSSKV 229
                 |:|||.||.|:::|..|:||:.|||::.:::||.|..|.|||:|...|.::|:::...| 
  Rat   122 -----PEVRLVKLPFFNMLDELLKPTELVPQSAEKLQESPCIFALTPRQVEMIRNSRELQPGVK- 180

  Fly   230 EHAIQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVK 294
              |:||.||.|..:|||.|||.:|||:.||||:..|.:|...|:|:|.||||||.||:|:|..:.
  Rat   181 --AVQVVLRICYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEPKRPCRPINLTHLMY 243

  Fly   295 LSPTVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEKLTEDADC 359
            || :.||.|||.| .:|.:||.:|:|||::|||:.||||:||.|||..:..:.|:||||..|.|.
  Rat   244 LS-SATNRITVTW-GNYGKSYSVALYLVRQLTSSDLLQRLKTIGVKHPELCKALVKEKLRLDPDS 306

  Fly   360 EIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAIYDNLV 424
            |||||.::|||.|||.||::.:||||.||:|||||||..||||||:||||.||||||||.||.|:
  Rat   307 EIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKPTWMCPVCDKPAAYDQLI 371

  Fly   425 IDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQKVEVISDDIELISDDA 489
            |||...::|...   .|..||:...:|||..  :|:|.:...:|..|.         :.|.:.||
  Rat   372 IDGLLSKILSEC---EDADEIEFLAEGSWRP--IRAEKEPSCSPQGPI---------LVLGTSDA 422

  Fly   490 KPVKRDLSPAQDEQ----------------------PTSTSNSETVDLTLSDS------------ 520
                ..|:||....                      ....:.::.|||||..|            
  Rat   423 ----NGLAPASSTPGMGSGLSGPGGAGGGAGAAGGLENGKTGADVVDLTLDSSSSSEDEDEDEDD 483

  Fly   521 ---DDDMPLAKRRPPAKQAV 537
               ||:.|..|||.|.::.:
  Rat   484 DEDDDEGPRPKRRCPFQKGL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 13/33 (39%)
PINIT 171..307 CDD:291022 65/135 (48%)
zf-MIZ 368..417 CDD:280964 36/48 (75%)
Pias4NP_001094227.1 SAP 12..46 CDD:128789 13/33 (39%)
PINIT 124..262 CDD:291022 67/142 (47%)
zf-MIZ 315..364 CDD:280964 36/48 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340872
Domainoid 1 1.000 95 1.000 Domainoid score I7210
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205949at2759
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 1 1.000 - - otm44659
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10782
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X350
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.810

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