DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and pias1

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_002932990.1 Gene:pias1 / 100488714 XenbaseID:XB-GENE-486558 Length:648 Species:Xenopus tropicalis


Alignment Length:653 Identity:254/653 - (38%)
Similarity:358/653 - (54%) Gaps:106/653 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ECEQMVQMLRVVELQKILSFLNISFAGRKTDLQSRILSFLRTNLE-LLAPKVQEVYAQSVQEQNA 107
            |.:|||..|||.|||.:|.:...:..|||.:|.::.|..|:|... .:..|::|:|     .:..
 Frog     6 ELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKTGCSPAVQMKIKELY-----RRRF 65

  Fly   108 TLQYIDPT-----RMYSH---IQLPPTVQPN-------------PVGLVGSGQGVQVPGGQMNVV 151
            .|:.:.|.     .::|.   :.|.|:..|.             ||.|        :|..::::.
 Frog    66 PLKILTPADFSLPSVHSSSMPVNLSPSSIPQLSYDGHPASSPLMPVSL--------LPKHELDLP 122

  Fly   152 GGAPFLHTHSINSQLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATE 216
            ..|..||        |:||||:|:||.|||:|..||||::|...|:||.||..|.|.|||||..:
 Frog   123 HLASNLH--------PVHPDVKLQKLPFYDLLDELIKPTSLASDNSQRFQETCFAFALTPQQVQQ 179

  Fly   217 IASNRDIRNSSKVEHAIQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPK 281
            |:|:.|| :.:|.:..:||||||||.||||.|||.||||:.||||.|.|.||..:|..:..||||
 Frog   180 ISSSMDI-SGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNGKPCNLPGYLPPTKNGVEPK 243

  Fly   282 RPPRPVNVTSNVKLSPTVTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTR 346
            ||.||:|:||.|:||.||.|||.|.|..:..|::.|||||||:|:|..||||::.||::..|::|
 Frog   244 RPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNFSLAVYLVKQLSSAILLQRLRAKGIRNPDHSR 308

  Fly   347 GLIKEKLTEDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNC 411
            .|||||||.|.|.|||||.|:|||.||||||::.:|||:.||||||||||:||:||||:||||.|
 Frog   309 ALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRSLTCSHLQCFDATLYIQMNEKKPTWVC 373

  Fly   412 PVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSWSTPGLRSETQILD-TPSKPAQKV 475
            |||||.|.|::|:|||.|.|:|...   :|..|||..:|||||.  :||:.::.: |.|......
 Frog   374 PVCDKKAPYEHLIIDGLFMEILKCC---TDCDEIQFKEDGSWSP--MRSKKEVQEVTTSYNGVDS 433

  Fly   476 EVISDDIELISDDAKPVKRDLSPAQDEQPTSTSNSETVDLTL---SDSDDDMPLAKRRPPAKQAV 537
            ..||..:|            ...:.::|.:.....|.:|||:   ||.:::.|..||..|:....
 Frog   434 GCISSSVE------------HQVSSNQQSSKNKKVEVIDLTIDSSSDEEEEEPCPKRSCPSITPA 486

  Fly   538 ASSTSNGSGGGQR-----AYTPAQQPQQS---ESPEQQASRQSPEKQTVSEQQLQ---------- 584
            :..::.|....|.     :.||:..|..|   .:|..|..|. |...|.....||          
 Frog   487 SPLSNKGMLNLQHQASPISRTPSLPPVDSTYINAPILQDYRH-PFHMTHMPYDLQGLDFFPFLSG 550

  Fly   585 QQQHEQPATAAVHASLLESLAAAVADQKHF------------QL-LDLAAVAAAAAATASSGQSQ 636
            :.||       .:.|||.:.|||.:::...            || ||....:|:::..|::|  .
 Frog   551 ENQH-------YNTSLLAAAAAAASEEPDLLHSSRFFPYTSSQLFLDQLNASASSSLPATNG--S 606

  Fly   637 NAG 639
            |:|
 Frog   607 NSG 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789 13/33 (39%)
PINIT 171..307 CDD:291022 79/135 (59%)
zf-MIZ 368..417 CDD:280964 37/48 (77%)
pias1XP_002932990.1 SAP 11..45 CDD:128789 13/33 (39%)
PINIT 136..279 CDD:373014 79/143 (55%)
COG5222 <312..427 CDD:227547 72/119 (61%)
SP-RING_PIAS 331..378 CDD:319704 35/46 (76%)
SP-RING finger 334..376 CDD:319704 31/41 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3491
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22953
Inparanoid 1 1.050 390 1.000 Inparanoid score I1954
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205949at2759
OrthoFinder 1 1.000 - - FOG0000526
OrthoInspector 1 1.000 - - otm47702
Panther 1 1.100 - - O PTHR10782
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X350
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.070

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