DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-10 and zmiz2

DIOPT Version :9

Sequence 1:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_002932592.1 Gene:zmiz2 / 100126065 XenbaseID:XB-GENE-999376 Length:904 Species:Xenopus tropicalis


Alignment Length:604 Identity:133/604 - (22%)
Similarity:210/604 - (34%) Gaps:181/604 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 YAQSVQEQNATLQYIDPTRM-YSHIQLPPTVQPNPVGLVGSGQGVQVP---GGQMNVVGGAPFLH 158
            ||.:..:|:|........|| .|..|..|...|       .|...::.   .||.|...|..|.:
 Frog   293 YAPTTPQQSAPSPSYPTHRMQQSMSQYLPQAGP-------GGHFYKLTDQYNGQSNNFNGGNFAY 350

  Fly   159 THSINS---QLPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTQRV---QEV--PFYFTLTP---- 211
            ..::..   .:|.:|...|.        |....|.|.....|..:   |:|  ||...:.|    
 Frog   351 NQTMTGPGRTMPGYPSSPLP--------GNPTPPMTPGSSATPYMSPGQDVKSPFLPDVKPPHNS 407

  Fly   212 --QQATEIASN--------RD--IRNSSKVEHAIQV-----QLRFCLVETSCDQED------CF- 252
              |..|..|::        ||  :....:::|.:.|     .||..:.:|...:.|      |: 
 Frog   408 LHQSPTGTANDELRLTFPVRDGIVLEPFRLQHNLAVSNHVFHLRESVYKTLMMRPDLELQFKCYH 472

  Fly   253 ----------PPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVKL------SP---T 298
                      |.:|.|.||:                .|....|..|.||:..|      .|   :
 Frog   473 HEDRQMNTNWPCSVQVSVNS----------------TPLSIERGDNKTSHKPLYLKQVCQPGRNS 521

  Fly   299 VTNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYTRGLIKEKLT--------- 354
            :..|::...|     |:...:.||.:.:...:||.:..|.:.||::....||...:         
 Frog   522 IQITVSACCC-----SHLFVLQLVHRPSVRSVLQGLIKKRLLPAEHCITKIKRNFSSGSIPGTPG 581

  Fly   355 ---EDADCEIATTMLKVSLNCPLGKMKMLLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDK 416
               ||.   :..|.:||||.||:...::.||.|...|.|:||||...|||:|..:.||.||||:|
 Frog   582 PNGEDG---VEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNK 643

  Fly   417 PAIYDNLVIDGYFQEVLGSSLL--KSDDTEIQLHQDGSWSTPGLRSETQILDTPSKPAQK----- 474
            .|:.:.|.:|.|   :||:.|.  .||..||.:....||....::.:|.|.:....|..|     
 Frog   644 TALLEGLEVDQY---MLGTLLYIQNSDYEEITIDPTCSWKPVPVKPDTHIKEETDGPVLKRCRSL 705

  Fly   475 ---VEVISDDIELI-----------------------------------------SDDAKPVKRD 495
               ..|:.:.:|||                                         |:...|...:
 Frog   706 SPAHMVMPNVMELIAALGPSSSPFNNIQSAGSSDYANQGPGFQNPGGFSDGGFTSSNPGTPTMNE 770

  Fly   496 LSPAQDEQPTSTSNSETVDLTLSDSDDDMPLAKRRPPAKQAVASSTSNGSGGGQRAYTPAQQPQQ 560
            .:|.. ..|.|..:.....|.:.:.....|:..:.||            ||..:..:.|:|.|..
 Frog   771 FNPTA-PPPISYQSDIPSSLLVPEKAGGPPMHGQVPP------------SGRIEPTHNPSQSPHT 822

  Fly   561 ----SESPEQQASRQSPEK 575
                |:|..|...|.:|.:
 Frog   823 SNIGSQSAHQLHHRNTPRQ 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 171..307 CDD:291022 35/187 (19%)
zf-MIZ 368..417 CDD:280964 24/48 (50%)
zmiz2XP_002932592.1 SP-RING_ZMIZ 596..643 CDD:319705 23/46 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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