DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phax and AT3G20430

DIOPT Version :9

Sequence 1:NP_610456.4 Gene:Phax / 35926 FlyBaseID:FBgn0033380 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_188678.1 Gene:AT3G20430 / 821588 AraportID:AT3G20430 Length:265 Species:Arabidopsis thaliana


Alignment Length:345 Identity:72/345 - (20%)
Similarity:110/345 - (31%) Gaps:115/345 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ALQEDALSENMRGCDVTRSGRDRNVENYDFSLRYRLNGENTLKRRLSNSSEDG--------GECS 179
            |:.|:...||:...::........|.::|..     :||.      .|...||        ||.:
plant    10 AINEEDGFENLEDVEMVDVEEGEIVVDHDLD-----SGER------QNDDGDGVKDKEAILGEKN 63

  Fly   180 HPAHKRGRPSSRPITGNQQRGLVKSRTGHRSRRGTSSASGSSDFCEPRHILDLNEVGERDPSDV- 243
                           |.||....|.:...:.|:|.              ::|       .|..| 
plant    64 ---------------GLQQTNKNKRKKKKKKRKGP--------------VMD-------KPMSVD 92

  Fly   244 --ATEMASKLYEEKDELLVRVVEVLGIDVCLELYKETQRIEADGGMMIKNGIRRRTPGGVFLFLI 306
              ..:...:|.|:|..::...|..|||....:|..|...||..||.:..:|.|:||.|||..   
plant    93 WFVRDTCRRLKEKKSYMIYTAVGCLGIAALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLW--- 154

  Fly   307 KHHDNITQEQQKRIFSEDRQSLSKSRKQIETLMRDRKVEELKKCLSKQVTELPTLNQRKEYYMQG 371
                ||.:.:|...:.|    :.|..|:.|...|             |....|....:::   ||
plant   155 ----NIIKARQPEAYRE----IMKKTKEFEKQFR-------------QPNTRPKSGPKRD---QG 195

  Fly   372 DEQSEDKQPGSLSNPPP-------SPVGAEQEHDSPEYRTHEININLVDNAELPSTSKAAAAAQG 429
             ..||....|::|....       .|| |||....||.....::    :...:|           
plant   196 -SSSEGLASGNVSADEALVSEMCVMPV-AEQTESKPEKERKSVH----ERIRVP----------- 243

  Fly   430 APLKDLISYDHDFLDVNCGD 449
                  :|||..|.|....|
plant   244 ------VSYDDLFRDAPLDD 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhaxNP_610456.4 RNA_GG_bind 243..326 CDD:287260 25/85 (29%)
AT3G20430NP_188678.1 RNA_GG_bind 94..174 CDD:402048 25/90 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 40 1.000 Domainoid score I4855
eggNOG 1 0.900 - - E1_KOG3948
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006484
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13135
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.000

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