Sequence 1: | NP_610456.4 | Gene: | Phax / 35926 | FlyBaseID: | FBgn0033380 | Length: | 453 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775156.2 | Gene: | Phax / 286917 | RGDID: | 708448 | Length: | 385 | Species: | Rattus norvegicus |
Alignment Length: | 475 | Identity: | 129/475 - (27%) |
---|---|---|---|
Similarity: | 192/475 - (40%) | Gaps: | 113/475 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 MELHANDVDLEDGELSESDDDGVYTPLQRP-------DGAEKVASPLTTCHQIQTALEDESQSNS 59
Fly 60 DSSTAESSEDGCIKKLRTESTGPDGHKKRKKRIRRTVMRRVPPTDAEMQP----------NRARF 114
Fly 115 KKYNVWASALQE---DALSENM--RGCDVTRSGRDRNVENYDFSLRYRLNGENTLKRRLSNSSED 174
Fly 175 GGECSHPAHKRGRPSSRPITGNQQRGL-VKSRTGHRSRRGTSSASGSSDFCEPRHILDLNEVGER 238
Fly 239 DPSDVATEMASKLYEEKDELLVRVVEVLGIDVCLELYKETQRIEADGGMMIKNGIRRRTPGGVFL 303
Fly 304 FLIKHHDNITQEQQKRIFSEDRQSLSKSRKQIETLMRDRKVEELKKCLSKQVTELPTLNQRKEYY 368
Fly 369 MQGDEQSEDKQPGSLSNPPPSPVGAEQEHDSPEYRTHEININLVDNAELPSTSKAAAAAQGAPLK 433
Fly 434 DLISYDHDFLDVNCGDMDFF 453 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Phax | NP_610456.4 | RNA_GG_bind | 243..326 | CDD:287260 | 41/82 (50%) |
Phax | NP_775156.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..26 | 11/24 (46%) | |
Necessary for interaction with CBP80. /evidence=ECO:0000250 | 2..320 | 101/340 (30%) | |||
Nuclear localization signal. /evidence=ECO:0000250 | 71..74 | 0/2 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 72..101 | 4/28 (14%) | |||
Nuclear export signal. /evidence=ECO:0000250 | 120..129 | 5/11 (45%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 164..192 | 5/27 (19%) | |||
Nuclear localization signal. /evidence=ECO:0000250 | 189..192 | 0/2 (0%) | |||
Sufficient for poly U RNA-binding. /evidence=ECO:0000250 | 219..319 | 43/99 (43%) | |||
RNA_GG_bind | 221..304 | CDD:287260 | 37/82 (45%) | ||
Necessary for poly U RNA-binding and snRNA export. /evidence=ECO:0000250 | 270..278 | 3/7 (43%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 334..385 | 9/50 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166346270 | |
Domainoid | 1 | 1.000 | 80 | 1.000 | Domainoid score | I8430 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3948 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I4823 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1223195at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006484 | |
OrthoInspector | 1 | 1.000 | - | - | oto98301 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107898 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13135 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5458 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.760 |