DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and HNRNPDL

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_112740.1 Gene:HNRNPDL / 9987 HGNCID:5037 Length:420 Species:Homo sapiens


Alignment Length:213 Identity:46/213 - (21%)
Similarity:88/213 - (41%) Gaps:59/213 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADVLDIDNAEEF----------EVDEDGDQGI------------------------VRLKEKAK 31
            |.|:.:..|.|||          ...:||...|                        ..:|....
Human   120 MEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPV 184

  Fly    32 HRKGRGFG----SDSNTREAIHSYERVRNEDDDEL-EPGPQRSVEG----WILFVTSIHEEAQED 87
            ..:.||||    .|:.:.:.:  .|...::.|.:| :|...::::|    ..:||..:..:..|:
Human   185 TGRSRGFGFVLFKDAASVDKV--LELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEE 247

  Fly    88 EIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEY---ETHKQALAAKEALNGAEIMGQTIQVDWC 149
            :|:|.|..:|||:||.|.:|.:|...:|:..:.|   |..|:.|.::....|:   |:      |
Human   248 QIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGS---GK------C 303

  Fly   150 FVK--GPKRVKKSEKRRR 165
            .:|  .||.|.:.:::::
Human   304 EIKVAQPKEVYRQQQQQQ 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 19/112 (17%)
RRM_RBM8 67..154 CDD:409762 24/95 (25%)
HNRNPDLNP_112740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..120 46/213 (22%)
RRM1_hnRPDL 149..224 CDD:410152 11/76 (14%)
RRM2_hnRPDL 234..308 CDD:409998 23/82 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..348 1/9 (11%)
Necessary for interaction with TNPO1. /evidence=ECO:0000269|PubMed:9524220 342..420
Necessary for its nuclear import and export 396..420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..420
Blue background indicates that the domain is not in the aligned region.

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