DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and IST3

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_012270.1 Gene:IST3 / 854821 SGDID:S000001444 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:112 Identity:31/112 - (27%)
Similarity:61/112 - (54%) Gaps:9/112 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RVRNEDDDELEPGPQRSVEGW--------ILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRR 109
            :::..:|.||:.|.....:.|        .:::.:::.|..|.:|...|.:||...::.|:.|..
Yeast     3 KIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDEN 67

  Fly   110 TGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVKGPKR 156
            ||.|:|:|.::||..:..:.|.:.|||.:|.|:.:::|..|.: |||
Yeast    68 TGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHTFYR-PKR 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 5/34 (15%)
RRM_RBM8 67..154 CDD:409762 24/94 (26%)
IST3NP_012270.1 RRM_ist3_like 22..109 CDD:409845 23/86 (27%)

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