DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and GR-RBP5

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_177563.1 Gene:GR-RBP5 / 843763 AraportID:AT1G74230 Length:289 Species:Arabidopsis thaliana


Alignment Length:79 Identity:25/79 - (31%)
Similarity:47/79 - (59%) Gaps:1/79 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEI 139
            :||..|.....|..::|.|..|||:.:..:.:||.||.|:|:|.|.:.:.::|..|.: |:|.::
plant    36 IFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDL 99

  Fly   140 MGQTIQVDWCFVKG 153
            .|:.|:|::...:|
plant   100 HGRRIRVNYATERG 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 2/4 (50%)
RRM_RBM8 67..154 CDD:409762 25/79 (32%)
GR-RBP5NP_177563.1 RRM 33..111 CDD:440488 24/75 (32%)

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