DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and AT1G73530

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_177494.1 Gene:AT1G73530 / 843687 AraportID:AT1G73530 Length:181 Species:Arabidopsis thaliana


Alignment Length:83 Identity:21/83 - (25%)
Similarity:47/83 - (56%) Gaps:5/83 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALA 129
            ||:..     |:|:.:.....||.:::.|..:|.:.::::.:|:.....||:|.:.|||.::|:.
plant    74 GPKTK-----LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMK 133

  Fly   130 AKEALNGAEIMGQTIQVD 147
            |.:.::|..:.|:.|.|:
plant   134 AIQGMHGKFLDGRVIFVE 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 4/14 (29%)
RRM_RBM8 67..154 CDD:409762 19/81 (23%)
AT1G73530NP_177494.1 RRM 78..158 CDD:440488 19/79 (24%)

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