DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and SR45a

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_563787.2 Gene:SR45a / 837246 AraportID:AT1G07350 Length:382 Species:Arabidopsis thaliana


Alignment Length:151 Identity:32/151 - (21%)
Similarity:65/151 - (43%) Gaps:18/151 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QGIVRLKEKAKHRKGRGFGSDSNTREAIHSYERVRNED-DDELEPGPQRSVE------GWILFVT 78
            |.::....:.::|....:...|....::..|::.|... ...|...|.|||.      |..|:||
plant    16 QRVLEYPLRLENRSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVT 80

  Fly    79 SIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQT 143
            .:.....|.::::.|...|::.::||.||..|..|:|:..:..::...|.....:|:.:.:.|:.
plant    81 GLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRV 145

  Fly   144 IQVDWCFVKGPKRVKKSEKRR 164
            |.|:           |:.:||
plant   146 ITVE-----------KARRRR 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 14/65 (22%)
RRM_RBM8 67..154 CDD:409762 22/92 (24%)
SR45aNP_563787.2 RRM 74..151 CDD:440488 19/87 (22%)

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