DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and AT5G55550

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001331843.1 Gene:AT5G55550 / 835649 AraportID:AT5G55550 Length:507 Species:Arabidopsis thaliana


Alignment Length:68 Identity:14/68 - (20%)
Similarity:35/68 - (51%) Gaps:3/68 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYE---THKQALAAKEALNG 136
            ||:..|..:..|:.:::.|.:||::....:..||.||.::|:..:.:.   ..::.:..|..::|
plant     8 LFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHIIDG 72

  Fly   137 AEI 139
            ..:
plant    73 RTV 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 2/4 (50%)
RRM_RBM8 67..154 CDD:409762 14/68 (21%)
AT5G55550NP_001331843.1 RRM1_hnRNPA_hnRNPD_like 8..75 CDD:409763 14/66 (21%)
ELAV_HUD_SF 19..>329 CDD:273741 11/57 (19%)
RRM2_Hrp1p 158..235 CDD:409767
Blue background indicates that the domain is not in the aligned region.

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