Protein Alignment tsu and RS40

DIOPT Version :10

• Sequence 1: NP_610454.2
• Gene: tsu / 35924
• FlyBaseID: FBgn0033378
• Length: 165
• Species: Drosophila melanogaster
• Sequence 2: NP_194280.1
• Gene: RS40 / 828654
• AraportID: AT4G25500
• Length: 350
• Species: Arabidopsis thaliana
• Alignment Length: 175
• Identity: 40/175 - (22%)
• Similarity: 69/175 - (39%)
• Gaps: 48/175 - (27%)

  Fly    14 EVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHSYERVRNEDDDELEPGPQRSVEG------ 72
            |.:.|.:..|..|......||||                |:|.|.......|.:||..|
plant    43 EDERDAEDAIRALDRFEFGRKGR----------------RLRVEWTKSERGGDKRSGGGSRRSSS 91

  Fly    73 -----WILFVTSIH-EEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAK 131
                 ..|||.:.. :..:..::::.|..||:|.|:.:.        :.:|.::||..:.|..|.
plant    92 SMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIR--------RNFAFIQYEAQEDATRAL 148

  Fly   132 EALNGAEIMGQTIQVDWCFVKGP-----------KRVKKSEKRRR 165
            :|.|.:::|.:.|.|::. ||..           :|.:..|:|||
plant   149 DASNNSKLMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRR 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tsu	NP_610454.2	PBP2_NikA_DppA_OppA_like	10..>80	CDD:445520	18/76 (24%)
		RRM_RBM8	67..154	CDD:409762	23/98 (23%)
RS40	NP_194280.1	RRM1_AtRSp31_like	2..73	CDD:409680	11/45 (24%)
		RRM_SF	98..167	CDD:473069	18/77 (23%)