DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and RS31

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_567120.1 Gene:RS31 / 825359 AraportID:AT3G61860 Length:264 Species:Arabidopsis thaliana


Alignment Length:181 Identity:37/181 - (20%)
Similarity:69/181 - (38%) Gaps:61/181 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEVDEDGDQGIVRLK-------------EKAKHRKGRGFG---SDSNTREAIHSYERVRNEDDDE 61
            ||.:.|.:..|.:|.             |.||..:||..|   :.||.:                
plant    42 FEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLK---------------- 90

  Fly    62 LEPGPQRSVEGWILFVTSIHE-EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHK 125
                |.::     |||.:... ..:|.:|::.|..||::.|:.:.        :.::.|::||.:
plant    91 ----PTKT-----LFVINFDPIRTKEHDIEKHFEPYGKVTNVRIR--------RNFSFVQFETQE 138

  Fly   126 QALAAKEALNGAEIMGQTIQVDWCFV-----------KGPKRVKKSEKRRR 165
            .|..|.||...::|:.:.:.|::...           :.|:|......|||
plant   139 DATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 17/82 (21%)
RRM_RBM8 67..154 CDD:409762 18/98 (18%)
RS31NP_567120.1 RRM_SF 2..73 CDD:473069 6/30 (20%)
RRM2_AtRSp31_like 94..163 CDD:409899 18/81 (22%)
PTZ00449 <138..209 CDD:185628 11/52 (21%)

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