DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and rbm8a

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001039147.1 Gene:rbm8a / 733972 XenbaseID:XB-GENE-6250837 Length:174 Species:Xenopus tropicalis


Alignment Length:168 Identity:109/168 - (64%)
Similarity:130/168 - (77%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADVLDIDNA--EEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAI-HSYERVRNEDDDEL 62
            ||||||:..|  |:|.:|||||:.|.:||||||.|||||||:|..||..| ..|:.|..:.|   
 Frog     1 MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGADEGTRARIREDYDSVEQDGD--- 62

  Fly    63 EPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQA 127
            ||||||||||||||||.:||||.|::|.:||.::||||||||||||||||.||||||||||:|:|
 Frog    63 EPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEA 127

  Fly   128 LAAKEALNGAEIMGQTIQVDWCFVKGPKRVKKSEKRRR 165
            |||.|.|||.::|||.|.|||.||:||.:.|:...|||
 Frog   128 LAAMEGLNGQDLMGQPISVDWGFVRGPPKGKRRSGRRR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 45/72 (63%)
RRM_RBM8 67..154 CDD:409762 64/86 (74%)
rbm8aNP_001039147.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 41/71 (58%)
RRM_RBM8 67..154 CDD:409762 64/86 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..174 10/19 (53%)

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