DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and Nifk

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_080748.3 Gene:Nifk / 67949 MGIID:1915199 Length:317 Species:Mus musculus


Alignment Length:62 Identity:18/62 - (29%)
Similarity:31/62 - (50%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 ILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALN 135
            ::::..:.....|..|......:|:|....|:..:|||.|||||.||:|:...|....|.::
Mouse    48 VVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMD 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 0/5 (0%)
RRM_RBM8 67..154 CDD:409762 18/62 (29%)
NifkNP_080748.3 RRM_NIFK_like 48..121 CDD:409748 18/62 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..317
hNIFK_binding 251..288 CDD:463489
Blue background indicates that the domain is not in the aligned region.

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