DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tsu and Rbm8a

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001095877.1 Gene:Rbm8a / 60365 MGIID:1913129 Length:174 Species:Mus musculus


Alignment Length:168 Identity:106/168 - (63%)
Similarity:129/168 - (76%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADVLDIDNA--EEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAI-HSYERVRNEDDDEL 62
            ||||||:..|  |:|.:|||||:.|.:||||||.||||||||:..:|..: ..|:.|..:.|   
Mouse     1 MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQDGD--- 62

  Fly    63 EPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQA 127
            ||||||||||||||||.:||||.|::|.:||.:||||||||||||||||:.|||.||||||:|:|
Mouse    63 EPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127

  Fly   128 LAAKEALNGAEIMGQTIQVDWCFVKGPKRVKKSEKRRR 165
            .||.|.|||.::|||.|.||||||:||.:.|:...|||
Mouse   128 QAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 43/72 (60%)
RRM_RBM8 67..154 CDD:409762 63/86 (73%)
Rbm8aNP_001095877.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 39/71 (55%)
RRM_RBM8 67..151 CDD:409762 61/83 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..174 7/15 (47%)

Return to query results.
Submit another query.