DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and CG34334

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001097042.1 Gene:CG34334 / 5740122 FlyBaseID:FBgn0263829 Length:708 Species:Drosophila melanogaster


Alignment Length:122 Identity:34/122 - (27%)
Similarity:56/122 - (45%) Gaps:10/122 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HRKGRGFGSDSNTR----EAIHSYERV--RNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQ 90
            ||:|.|.|..:...    .|:....:|  ||..|......|.|:|.   |.:..:..:..::.|.
  Fly   491 HRRGEGDGEGAEASGRGYRAVGEVNKVAYRNGKDAFKFRQPVRNVR---LHIKGLTRQVTKEHIT 552

  Fly    91 EKFCDYGEIKNIHLNLDRRTG-FSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
            |.|..:|.:..:...:||..| ..:|||.|||...:...:|.:.:||.:|.|:.|:|
  Fly   553 EIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGGQIDGKLIRV 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 14/53 (26%)
RRM_RBM8 67..154 CDD:409762 23/81 (28%)
CG34334NP_001097042.1 Herpes_BLLF1 <312..504 CDD:282904 5/12 (42%)
RRM_RNPS1 537..610 CDD:409800 21/73 (29%)

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