DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and snrnp35

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001025412.1 Gene:snrnp35 / 569999 ZFINID:ZDB-GENE-050706-77 Length:208 Species:Danio rerio


Alignment Length:96 Identity:29/96 - (30%)
Similarity:46/96 - (47%) Gaps:19/96 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDELEP-------------GPQRSVEG---WILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNL 106
            |..::||             .|.|.|.|   ..|||..::.:..|:::::.|..:|:|:.:.|..
Zfish    19 DGTDVEPHDAGVWRAMLARYKPNRGVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRLRLVR 83

  Fly   107 DRRTGFSKGYALVEYETHKQALAAKEALNGA 137
            |..|||||.||.:||   |:..:.|.|...|
Zfish    84 DVVTGFSKRYAFIEY---KEERSLKRAWRDA 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 10/37 (27%)
RRM_RBM8 67..154 CDD:409762 25/74 (34%)
snrnp35NP_001025412.1 RRM_snRNP35 46..139 CDD:409683 23/69 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..208
Blue background indicates that the domain is not in the aligned region.

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