DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and rbmx2

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001020337.2 Gene:rbmx2 / 553240 ZFINID:ZDB-GENE-050626-88 Length:450 Species:Danio rerio


Alignment Length:161 Identity:43/161 - (26%)
Similarity:67/161 - (41%) Gaps:52/161 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NE-DDDELEPGPQRSV--------EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTG 111
            || ::.|.:.|.:.:|        ..|: |:.....|..|.:|...|..||||.||:|..|::||
Zfish    11 NELNEREAQLGIKETVSWHSVYKNSAWV-FIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTG 74

  Fly   112 FSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD------------------------WCF-- 150
            .|||:..:.||..:..:.|.:..||.:|.|:||:||                        .|.  
Zfish    75 KSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKDTDDIDDITKQLREEGCAPK 139

  Fly   151 ----------------VKGPKRVKKSEKRRR 165
                            ||.||:.||.:|:::
Zfish   140 PVSSSEEESAEEYAVPVKKPKKDKKEKKKKK 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 7/32 (22%)
RRM_RBM8 67..154 CDD:409762 34/136 (25%)
rbmx2NP_001020337.2 None

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