DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and Rbm34

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_766350.2 Gene:Rbm34 / 52202 MGIID:1098653 Length:442 Species:Mus musculus


Alignment Length:145 Identity:38/145 - (26%)
Similarity:62/145 - (42%) Gaps:31/145 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EFEVDEDGDQGIVRLKE-----KAKHRKG----RGFGSDSNTREAIHSYERVRNEDDDELEPGPQ 67
            :|..|:......|..|:     ||..|.|    .||              |:|.:...|.....:
Mouse   240 KFHPDQKSINAYVVFKDESAAAKALQRNGAQIAEGF--------------RIRVDLASETASRDK 290

  Fly    68 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYE-THKQALAAK 131
            |||     ||.::..:.::..::|.|.|.|.|..:.:..:..||..:|:..|.:| |....||.|
Mouse   291 RSV-----FVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK 350

  Fly   132 EALNGAEIMGQTIQV 146
              ||.:|:||:.::|
Mouse   351 --LNNSELMGRKLRV 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 18/76 (24%)
RRM_RBM8 67..154 CDD:409762 25/81 (31%)
Rbm34NP_766350.2 RRM1_RBM34 189..280 CDD:409828 12/53 (23%)
RRM2_RBM34 292..364 CDD:409829 24/79 (30%)

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