DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and tra2a

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_012819962.1 Gene:tra2a / 448073 XenbaseID:XB-GENE-492325 Length:341 Species:Xenopus tropicalis


Alignment Length:141 Identity:39/141 - (27%)
Similarity:63/141 - (44%) Gaps:25/141 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RLKEKAKHRKGRGFGSDSNTREAIHSYERVRNEDDDEL-----------EPGPQ--RSVEGWILF 76
            |.:.::..||.|     |.:|.....|.|.|:.....:           .|.|.  ..|.|..|:
 Frog    65 RSRSRSHSRKRR-----SKSRSYTPEYRRRRSRSHSPMSNRRRHNGSRANPDPNICIGVFGLSLY 124

  Fly    77 VTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMG 141
            .|       |.:::|.|..||.:..:::..|:|||.|:|:|.|.:|..:.:..|.|..||.|:.|
 Frog   125 TT-------ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDG 182

  Fly   142 QTIQVDWCFVK 152
            :.|:||:...|
 Frog   183 RRIRVDYSITK 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 15/67 (22%)
RRM_RBM8 67..154 CDD:409762 28/88 (32%)
tra2aXP_012819962.1 RRM_TRA2A 110..193 CDD:410047 29/89 (33%)

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