DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and tra2a

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_956710.1 Gene:tra2a / 393388 ZFINID:ZDB-GENE-040426-1391 Length:297 Species:Danio rerio


Alignment Length:136 Identity:40/136 - (29%)
Similarity:68/136 - (50%) Gaps:17/136 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KAKHRKGRGFGSDSNTRE-----AIHSYERVR---NEDDDELEPGPQR--SVEGWILFVTSIHEE 83
            :::.|:.|....:||.|:     :.:|::..:   |:.|....|.|..  .|.|..|:.|     
Zfish    88 ESRRRRSRSASPNSNRRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTT----- 147

  Fly    84 AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 148
              |.:::|.|..||.:..:::..|:|||.|:|:|.|.:|....|..|.|..||.|:.|:.|:||:
Zfish   148 --ERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDY 210

  Fly   149 CFVKGP 154
            ...|.|
Zfish   211 SITKRP 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 14/60 (23%)
RRM_RBM8 67..154 CDD:409762 29/88 (33%)
tra2aNP_956710.1 RRM_TRA2 134..213 CDD:409798 28/85 (33%)

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