DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and tra2

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster


Alignment Length:118 Identity:32/118 - (27%)
Similarity:56/118 - (47%) Gaps:18/118 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KHRKGRGFGSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCD 95
            :||.||    .|..||.:|....         .|...|.:.     |..::....:.:::|.|..
  Fly    73 RHRSGR----SSRDRERMHKSRE---------HPQASRCIG-----VFGLNTNTSQHKVRELFNK 119

  Fly    96 YGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 148
            ||.|:.|.:.:|.:|..|:|:..:.:|....|.|||::.:|.|:.|:.|:||:
  Fly   120 YGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDF 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 11/48 (23%)
RRM_RBM8 67..154 CDD:409762 23/82 (28%)
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 23/82 (28%)

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