DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and HNRNPA3

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_919223.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens


Alignment Length:153 Identity:37/153 - (24%)
Similarity:63/153 - (41%) Gaps:43/153 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RKGRGFG--------------------SDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFV 77
            ::.||||                    .|....|...:..|     :|.::||...:|:.  :||
Human    73 KRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSR-----EDSVKPGAHLTVKK--IFV 130

  Fly    78 TSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETH----KQALAAKEALNGAE 138
            ..|.|:.:|..:::.|..||:|:.|.:..||::|..:|:|.|.::.|    |..:.....:||..
Human   131 GGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHN 195

  Fly   139 IMGQTIQVDWCFVKGPKRVKKSE 161
                      |.||  |.:.|.|
Human   196 ----------CEVK--KALSKQE 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 13/66 (20%)
RRM_RBM8 67..154 CDD:409762 24/90 (27%)
HNRNPA3NP_919223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
RRM1_hnRNPA_like 36..113 CDD:409992 6/39 (15%)
RRM2_hnRNPA3 126..205 CDD:409996 24/92 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225 2/3 (67%)
HnRNPA1 331..>347 CDD:463312
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378
Blue background indicates that the domain is not in the aligned region.

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