DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and rbmx-2

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_495237.1 Gene:rbmx-2 / 183040 WormBaseID:WBGene00016245 Length:302 Species:Caenorhabditis elegans


Alignment Length:75 Identity:24/75 - (32%)
Similarity:41/75 - (54%) Gaps:1/75 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 WILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGA 137
            || ::..:.....|.::...|..|||:.||:|..|:.||.|||:|.:.|:..:..:.|.:..||.
 Worm    39 WI-YIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGI 102

  Fly   138 EIMGQTIQVD 147
            .:..:.|:||
 Worm   103 SLHKRMIRVD 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 2/6 (33%)
RRM_RBM8 67..154 CDD:409762 24/75 (32%)
rbmx-2NP_495237.1 RRM_ist3_like 29..117 CDD:409845 24/75 (32%)

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