DRSC/TRiP Functional Genomics Resources

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Protein Alignment tsu and LOC11176155

DIOPT Version :10

Sequence 1:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_003436593.1 Gene:LOC11176155 / 11176155 VectorBaseID:AGAMI1_003599 Length:420 Species:Anopheles gambiae


Alignment Length:190 Identity:45/190 - (23%)
Similarity:79/190 - (41%) Gaps:34/190 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVLDIDNAEE-------FEVDEDGDQGIVRLKE------------KAKHRKGRGFGSD--SNTRE 46
            |:.||...|.       .||||..:|......|            |.|.|:.....||  |::..
Mosquito   199 DIFDITKNEVRLLRDMLLEVDEKLEQFYSAYDEAFNYSSKDYRRWKRKRRRVTPLLSDSSSSSES 263

  Fly    47 AIHSYERVRNEDDDELEPGPQRSV------EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLN 105
            :..|...:.|....|:     |.:      |...|.:..::.:..|..:.:.|..||.:|:|.|.
Mosquito   264 SSSSVSEISNRSATEV-----RRILCGSNEENRCLGIFGMNPDTTEKTLMKLFSRYGHVKDIKLI 323

  Fly   106 LDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVKGPKRVKKSEKRRR 165
            .|.:|..|:||:.:.::....|..|:..|||..:.|:.::||  |.:......::::|:|
Mosquito   324 YDGKTNVSRGYSFIYFKHASDARRAQRKLNGTMLEGRKVRVD--FSRSKPHEPRADRRKR 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 19/96 (20%)
RRM_RBM8 67..154 CDD:409762 24/92 (26%)
LOC11176155XP_003436593.1 PABP-1234 38..>381 CDD:130689 44/188 (23%)
RRM_SF 123..187 CDD:409669
RRM_SF 290..367 CDD:473069 21/78 (27%)
Blue background indicates that the domain is not in the aligned region.

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